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Job DescriptionP0A715
Confidence43.60%DateThu Jan 5 11:04:29 GMT 2012
Rank464Aligned Residues145
% Identity14%Templatec3lu2B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:lmo2462 protein; PDBTitle: structure of lmo2462, a listeria monocytogenes amidohydrolase family2 putative dipeptidase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   100.........110.........120.........130.........140.........150.........160....... ..170...
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Query Sequence  SQAQPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNEKVILCD. . . . . . RGANFG
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Template Sequence  EQVNIFKQHVLHKGGIIHHVKKWCDLENLPEDKIGAXLTLEGIEPIGRDLDKLTQLLDGGVLSVGLTWNNANLAADGIXE
Template Known Secondary structure  TTTGGGT

ST

TT
SSGGGTT
TTS
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SSB
BTT
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   65....70.........80.........90.........100.........110.........120.........130.........140....
 
   174.....180.........190.........200.........210.........220.........230.........240.........250...
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Query Sequence  YDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGLAGLFIEAHPDPEHAKCDGPS
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Template Sequence  ERGAGLTRFGKDIIHLLN. ERKVFTDVSHLS. . . . . . . . . . . . . . . . . VKAFWETLEQAEF. . VIASHSSA. KAICAHPR
Template Known Secondary structure  TT


B
.TT

TTB
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SS..SS

B.TTTS

TT
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   145....150.........160.. .......170.... .....180....... ..190..... ....200...
 
   254.....260.....
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Query Sequence  ALPLAKLEPFLK
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Template Sequence  NLDDEQIKAXIE
Template Known Secondary structure  SB
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   204.....210.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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