Return to main results Retrieve Phyre Job Id

Job DescriptionP0A715
Confidence93.97%DateThu Jan 5 11:04:29 GMT 2012
Rank151Aligned Residues99
% Identity11%Templatec3lciA_
PDB info PDB header:lyaseChain: A: PDB Molecule:n-acetylneuraminate lyase; PDBTitle: the d-sialic acid aldolase mutant v251w
Resolution2.12 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.........80....... ..90....
Predicted Secondary structure 




























.


Query SS confidence 







































































.






Query Sequence  DLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQT. FGVKIIT
Query Conservation    
  





  

    

 

 

  
  



 

 
      

      
      
  
      . 

   
Alig confidence 
















.....
















........




.


















.






Template Conservation       

 

   
  
..... 
  
  
   


 
 ........
  
 .
   
   
      
       

 
Template Sequence  KGKIKLIAHVGCVSTAE. . . . . SQQLAASAKRYGFDAVS. . . . . . . . AVTPF. YYPFSFEEHCDHYRAIIDSADGLPMVV
Template Known Secondary structure  TTTS


SS.....T
S........


.SS


TTT

Template Predicted Secondary structure 








.....



........


.









Template SS confidence 















































































   71........80....... ..90.........100.... ..... 110.........120.........130......
 
   95 ....100........ .110.........120........
Predicted Secondary structure  ........

..




Query SS confidence 
. . . . . . . .












. .



















Query Sequence  D. . . . . . . . VHEPSQAQPVADV. . VDVIQLPAFLARQTDLVEAM
Query Conservation 
........  
      
   ..
   



    
 


   
Alig confidence 
........












..



















Template Conservation 

 
  

  
       
   
 
 


 
  
          
Template Sequence  YNIPALSGVKLTLDQINTLVTLPGVGALKQTSGDLYQMEQIRRE
Template Known Secondary structure 





TSTT



Template Predicted Secondary structure 


















Template SS confidence 











































   137..140.........150.........160.........170.........180
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions