Job Description P0A715 Confidence 96.14% Date Thu Jan 5 11:04:29 GMT 2012 Rank 71 Aligned Residues 226 % Identity 11% Template c3k13A_ PDB info PDB header:transferase Chain: A: PDB Molecule:5-methyltetrahydrofolate-homocysteine methyltransferase; PDBTitle: structure of the pterin-binding domain metr of 5-2 methyltetrahydrofolate-homocysteine methyltransferase from3 bacteroides thetaiotaomicron Resolution 2.00 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.											30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	P	F	V	L	F	G	G	M	N	V	L	E	.	.	.	.	.	.	.	.	.	.	S	R	D	L	A	M	R	I	C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M	K	I	F	Q	E	L	K
Query Conservation																.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.				.	.																							.	.	.	.	.	.
Template Conservation																													.	.																							.	.	.	.	.	.
Template Sequence		E	I	N	F	V	N	I	G	E	R	C	N	V	A	G	S	R	K	F	L	R	L	V	N	E	K	K	.	.	Y	D	E	A	L	S	I	A	R	Q	Q	V	E	D	G	A	L	V	I	D	V	N	.	.	.	.	.	.	X	D	D	G	L	L	D	A	R	T	E	X	T	T	F	L	N	L	I	X	S	E	P
Template Known Secondary structure			T	T										T	T	T										T	T		.	.														T	T		S						.	.	.	.	.	.				T	T	S															T
Template Predicted Secondary structure																													.	.																							.	.	.	.	.	.
Template SS confidence
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.			.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.							.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.						.	.	.	.	.	.	130	.	.	.	.	.	.	.			.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																									.																.	.	.	.	.															.	.		.	.
Query SS confidence																									.																.	.	.	.	.															.	.		.	.
Query Sequence		Q	T	F	G	V	K	I	I	T	D	V	H	E	P	S	Q	A	Q	P	V	A	D	V	.	V	D	V	I	Q	L	P	A	F	L	A	R	Q	T	D	.	.	.	.	.	L	V	E	A	M	A	K	T	G	A	V	I	N	V	.	.	K	.	.	K	P	Q	F	V	S	P	G	Q	M	G	N	I	V	D	K	F
Query Conservation																									.																.	.	.	.	.															.	.		.	.
Alig confidence																									.																.	.	.	.	.															.	.		.	.
Template Conservation
Template Sequence		E	I	A	R	V	P	V	X	I	D	S	S	K	W	E	V	I	E	A	G	L	K	C	L	Q	G	K	S	I	V	N	S	I	S	L	K	E	G	E	E	V	F	L	E	H	A	R	I	I	K	Q	Y	G	A	A	T	V	V	X	A	F	D	E	K	G	Q	A	D	T	A	A	R	K	I	E	V	C	E	R	A
Template Known Secondary structure					T	S							S													S	S									S	T	T																T							S			T	T					S
Template Predicted Secondary structure
Template SS confidence
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.
		156	.						.	.		160	.	.	.	.	.	.	.	.						.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.			.										.	.	.	.	.							.	.																																												.	.	.	.	.
Query SS confidence				.	.	.	.	.			.										.	.	.	.	.							.	.																																												.	.	.	.	.
Query Sequence		K	E	.	.	.	.	.	G	G	.	N	E	K	V	I	L	C	D	R	.	.	.	.	.	G	A	N	F	G	Y	.	.	D	N	L	V	V	D	M	L	G	F	S	I	M	K	K	V	S	G	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G	A	A	S	G	G	R	.	.	.	.	.
Query Conservation				.	.	.	.	.			.										.	.	.	.	.							.	.																																												.	.	.	.	.
Alig confidence				.	.	.	.	.			.										.	.	.	.	.							.	.																									.	.	.	.	.	.	.	.	.	.										.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	L	L	V	D	K	V	G	F	N	P	H	D	I	I	F	D	P	N	V	L	A	V	A	T	G	I	E	E	H	N	N	Y	A	V	D	F	I	E	A	T	G	W	I	R	K	N	L	P	G	A	H	V	S	G	.	.	.	.	.	.	.	.	.	.	G	V	S	N	L	S	F	S	F	R	G	N	N	Y
Template Known Secondary structure									T				G	G	G											S	S	S		G	G	G	T	T																S	T	T						.	.	.	.	.	.	.	.	.	.	B	G	G	G	G	G	G	G	G	T	T
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		502	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.											.	.	560	.	.	.	.	.	.	.	.	.	570	.
			218	.	220	.	.	.	.	.	.	.		.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure		.											.
Query SS confidence		.											.
Query Sequence		.	R	A	Q	V	A	E	L	A	R	A	.	G	M	A	V	G	L	A	G	L	F	I	E	A	H	P	D	P	E	H	A	K	C	D	G	P	S	A	L	P	L	A	K	L	E	P	F	L	K	Q	M
Query Conservation		.											.
Alig confidence		.											.															.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.
Template Sequence		I	R	E	A	X	H	A	V	F	L	Y	H	A	I	Q	Q	G	X	D	X	G	I	V	N	P	G	.	.	.	.	.	.	.	.	S	V	L	Y	S	D	I	P	A	D	T	L	E	K	I	E	D	V
Template Known Secondary structure																	T	T										.	.	.	.	.	.	.	.				G	G	G	S
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.
Template SS confidence
		572	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.									.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions