Job Description P0A715 Confidence 90.99% Date Thu Jan 5 11:04:29 GMT 2012 Rank 200 Aligned Residues 177 % Identity 10% Template c3js3C_ PDB info PDB header:lyase Chain: C: PDB Molecule:3-dehydroquinate dehydratase; PDBTitle: crystal structure of type i 3-dehydroquinate dehydratase (arod) from2 clostridium difficile with covalent reaction intermediate Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.		.	.	.	.	.	.	.
Predicted Secondary structure																																																																										.
Query SS confidence																																																																										.
Query Sequence		M	K	Q	K	V	V	S	I	G	D	I	N	V	A	N	D	L	P	F	V	L	F	G	G	M	N	V	L	E	S	R	D	L	A	M	R	I	C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	.	G	L	E	E	G	M	K
Query Conservation																																																																										.
Alig confidence						.																						.	.																.	.	.	.							.	.	.	.	.	.	.	.	.											.
Template Conservation						.																						.	.																.	.	.	.							.	.	.	.	.	.	.	.	.
Template Sequence		M	K	R	K	.	V	Q	V	K	N	I	T	I	G	E	G	R	P	K	I	C	V	P	I	I	G	.	.	K	N	K	K	D	I	I	K	E	A	K	E	L	K	D	.	.	.	.	A	C	L	D	I	I	.	.	.	.	.	.	.	.	.	E	W	R	V	D	F	F	E	N	V	E	N	I	K	E	V	K	E
Template Known Secondary structure						.				T	T				T	S	S	S										.	.	S	S											T	T	T	.	.	.	.	S	S		S			.	.	.	.	.	.	.	.	.				G	G	G		T	T	T	T
Template Predicted Secondary structure						.																						.	.																.	.	.	.							.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.		.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.			.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.										.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.
		80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.	.	.	.												100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120								.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure											.												.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Query SS confidence											.												.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Query Sequence		I	F	Q	E	L	K	Q	T	F	.	G	V	K	I	I	T	D	V	H	E	P	.	.	.	.	.	.	.	.	.	.	.	S	Q	A	Q	P	V	A	D	V	V	D	V	I	Q	L	P	A	F	L	A	R	.	.	.	.	.	.	.	Q	T	D	L	V	E	A	M	A	K	T	G	A	V	I	N	V	K	K	P
Query Conservation											.												.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Alig confidence											.												.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	L	Y	E	L	R	S	Y	I	H	D	I	P	L	L	F	T	F	R	S	V	V	E	G	G	E	K	L	I	S	R	D	Y	Y	T	T	L	N	K	E	I	S	N	T	G	L	V	D	L	I	D	V	E	L	F	M	G	D	E	V	I	D	E	V	V	N	F	A	H	K	K	E	V	K	V	I	I	S	N	H
Template Known Secondary structure											T	T	S									G	G	G	T		S																		T	S			S						G	G	G															T	T
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
						141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																																									.	.
Query SS confidence		.	.	.	.																																									.	.
Query Sequence		.	.	.	.	Q	F	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V	V	D	.	.	M	L	G	F	S	I	M	K	K	V	S	G	N	S	P	V	I	F
Query Conservation		.	.	.	.																																									.	.
Alig confidence		.	.	.	.		.																				.							.	.	.										.	.
Template Conservation							.																				.							.	.	.
Template Sequence		D	F	N	K	T	.	P	K	K	E	E	I	V	S	R	L	C	R	M	Q	E	L	G	A	D	.	L	P	K	I	A	V	.	.	.	M	P	Q	N	E	K	D	V	L	V	L	L	E	A	T	N	E	M	F	K	I	Y	A	D	R	P	I	I	T
Template Known Secondary structure			S	S			.																T	T		S	.							.	.	.			S	S																	T	T		S	S		B
Template Predicted Secondary structure							.																				.							.	.	.
Template SS confidence
		145	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.		.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions