Job Description P0A715 Confidence 82.07% Date Thu Jan 5 11:04:29 GMT 2012 Rank 286 Aligned Residues 181 % Identity 13% Template c3ivuB_ PDB info PDB header:transferase Chain: B: PDB Molecule:homocitrate synthase, mitochondrial; PDBTitle: homocitrate synthase lys4 bound to 2-og Resolution 2.72 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	V	L	E	S	R	D	L	A	M	R	I	C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M	K	I	F	Q	E	L	K	Q	T	F	G	V	K	I	I	T	D	V	H	E	P	S	Q	A	Q	P
Query Conservation
Alig confidence																					.	.	.	.											.	.	.	.	.	.	.	.	.	.																												.
Template Conservation																					.	.	.	.											.	.	.	.	.	.	.	.	.	.																												.
Template Sequence		A	N	A	F	F	D	T	E	K	K	I	Q	I	A	K	A	L	D	N	.	.	.	.	F	G	V	D	Y	I	E	L	T	S	.	.	.	.	.	.	.	.	.	.	P	V	A	S	E	Q	S	R	Q	D	C	E	A	I	C	K	L	G	L	K	C	K	I	L	T	H	I	.	R	C	H	M	D	D	A	R	V
Template Known Secondary structure		T	T																		.	.	.	.		T		S							.	.	.	.	.	.	.	.	.	.	G	G	G													T	S			S	S							.		S
Template Predicted Secondary structure																					.	.	.	.											.	.	.	.	.	.	.	.	.	.																												.
Template SS confidence
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.	.	.											.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.
		105	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120																.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure						.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query SS confidence						.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Query Sequence		V	A	D	V	.	V	D	V	I	Q	L	P	A	F	L	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	D	L	V	E	A	M	A	K	T	G	A	V	I	N	V	K	K	.	.	P	Q	F	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C
Query Conservation						.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Alig confidence						.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation
Template Sequence		A	V	E	T	G	V	D	G	V	D	V	V	I	G	T	S	Q	Y	L	R	K	Y	S	H	D	M	T	Y	I	I	D	S	A	T	E	V	I	N	F	V	K	S	K	G	I	E	V	R	F	S	S	E	D	S	F	R	S	D	L	V	D	L	L	S	L	Y	K	A	V	D	K	I	G	V	N	R	V	G	I	A
Template Known Secondary structure					T	T		S								G	G	G																										T	T								T	T	G	G	G	S																		S
Template Predicted Secondary structure
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		D	R	G	A	N	F	G	Y	D	N	L	V	V	D	M	L	G	F	S	I	M	K	K	V	S	G	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G	A	A	S	G	G	R	R	A	Q	V	A	E	L	A	R	A	G	M	A	V	G	L	A	G	L	F	I	E	A
Query Conservation
Alig confidence			.	.	.																					.								.						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation			.	.	.																					.								.						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		D	.	.	.	T	V	G	C	A	T	P	R	Q	V	Y	D	L	I	R	T	L	R	G	V	.	V	S	C	D	I	E	C	.	H	F	H	N	D	.	.	.	.	.	.	.	.	.	.	.	.	.	T	G	M	A	I	A	N	A	Y	C	A	L	E	A	G	A	T	.	.	H	I	D	T
Template Known Secondary structure			.	.	.	S	S	S																		.		S	S					.			B		T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S													T			.	.
Template Predicted Secondary structure			.	.	.																					.								.						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		196				.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.		.	.	.	.	.														.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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