Return to main results Retrieve Phyre Job Id

Job DescriptionP0A715
Confidence100.00%DateThu Jan 5 11:04:29 GMT 2012
Rank10Aligned Residues256
% Identity40%Templatec3fs2A_
PDB info PDB header:transferaseChain: A: PDB Molecule:2-dehydro-3-deoxyphosphooctonate aldolase; PDBTitle: crystal structure of 2-dehydro-3-deoxyphosphooctonate2 aldolase from bruciella melitensis at 1.85a resolution
Resolution1.85 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 


































Query SS confidence 















































































Query Sequence  KQKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIF
Query Conservation      
 

   

   
  





  

    

 

 

  
  



 

 
      

      
      
  
Alig confidence 









































....












..


...












Template Conservation      
 
    

   
  





   
 
 
   
   
 .... 

   
    
 ..   ...    
 
  
  
Template Sequence  ANSTVKVGNVTFSNSAPLALIAGPCQMETRDHAFEMAGRLKE. . . . MTDKLGIGLVYKS. . SFD. . . KANIGLEKALEVF
Template Known Secondary structure 

SSTT
TTS


SB


....T


..B

...




Template Predicted Secondary structure 














....



..


...




Template SS confidence 















































































   4.....10.........20.........30.........40..... ....50........ .60. ........70....
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
Predicted Secondary structure 























Query SS confidence 















































































Query Sequence  QELKQTFGVKIITDVHEPSQAQPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNE
Query Conservation         

   

  
      
   
   



    
 


   
  








   
  

  

  
   

 
Alig confidence 















































































Template Conservation   
     

   

  
      
   

  



    
  

   
  



 

 
      
   


 
   

 
Template Sequence  SDLKKEYGFPVLTDIHTEEQCAAVAPVVDVLQIPAFLCRQTDLLIAAARTGRVVNVKKGQFLAPWDMKNVLAKITESGNP
Template Known Secondary structure 




STTT
S
GGGTT
TTS

TT

GGGTTT

Template Predicted Secondary structure 

























Template SS confidence 















































































   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  KVILCDRGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGLAGLFIEAH
Query Conservation   
 
  
 
 

      

  
  
       


 
 

      
 
    
    
     



 

 
 




Alig confidence 





























..









........





























Template Conservation   
 
  

  

      

  
  
    .. 

  
 


........ 
  
    
  
  



 

 
  

 
Template Sequence  NVLATERGVSFGYNTLVSDMRALPIMAGLG. . APVIFDATHS. . . . . . . . VQQPGQREFVETLARAAVAVGVAGFFIETH
Template Known Secondary structure 



SSS


TTTTT..S
........T




GGG

S
Template Predicted Secondary structure 










..






........










Template SS confidence 















































































   164.....170.........180.........190... ......200... ......210.........220.........230...
 
   242.......250.........260.........270......
Predicted Secondary structure 














Query SS confidence 


































Query Sequence  PDPEHAKCDGPSALPLAKLEPFLKQMKAIDDLVKG
Query Conservation   
 
    
   

 
 

  

  

 

     
Alig confidence 


































Template Conservation     
 

 
   

 
 

  

  

 
      
Template Sequence  EDPDNAPSDGPNMVPIDKMPALLEKLMAFDRIAKA
Template Known Secondary structure  SSGGG
SSSGGG
GGGTT
Template Predicted Secondary structure 















Template SS confidence 


































   242.......250.........260.........270......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions