Job Description P0A715 Confidence 86.83% Date Thu Jan 5 11:04:29 GMT 2012 Rank 243 Aligned Residues 137 % Identity 23% Template c3ez4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei Resolution 2.10 Å

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		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.																			.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.
Predicted Secondary structure																																	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query SS confidence																																	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Query Sequence		M	K	I	F	Q	E	L	K	Q	T	F	G	V	K	I	I	T	D	V	H	E	P	S	Q	A	Q	P	V	A	D	V	.	V	D	V	I	Q	L	P	A	F	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	Q	T	D	L	V	E	A	M	A	K	T	G	A	V	I	.	N	V
Query Conservation																																	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Alig confidence																																	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		.
Template Conservation
Template Sequence		V	P	K	L	Q	A	M	R	E	A	G	E	K	I	A	M	L	T	S	Y	D	A	S	F	A	A	L	L	D	R	A	N	V	D	V	Q	L	I	G	D	S	L	G	N	V	L	Q	G	Q	A	T	T	L	P	V	T	L	D	D	I	A	Y	H	T	A	C	V	A	R	A	Q	P	R	G	L	V	V	A	D	L
Template Known Secondary structure											T	T										S										T	T		S						T	T					T	T			S	S	S	T	T																T			S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	P	Q	F	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V	V	D	M	L	G	F	S	I	M	K	K	V	S	G	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G	A	A	S	G	G	R
Query Conservation
Alig confidence																										.								.	.	.	.	.	.	.	.														.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.								.	.	.	.	.	.	.	.														.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	F	G	T	Y	G	T	P	A	D	A	F	A	S	A	V	K	L	M	R	A	G	A	Q	.	M	V	K	L	E	G	G	.	.	.	.	.	.	.	.	E	W	L	A	E	T	V	R	F	L	V	E	R	.	.	A	V	P	V	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	H	V	G	L	G
Template Known Secondary structure			T	T	S		S	S														T	T		S	.								.	.	.	.	.	.	.	.	G	G	G										T	.	.	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																										.								.	.	.	.	.	.	.	.														.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.		.	.	110	.	.	.	.									.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.															.	.	.	.	.	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	Q	V	A	E	L	A	R	A	G	M	A	V	G	L	A	G	L	F	I	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	A	Q	L	L	R	D	A	R	A	V	E	E	A	G	A	Q	L	I	V	L	E
Template Known Secondary structure																T		S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions