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Job DescriptionP0A715
Confidence59.50%DateThu Jan 5 11:04:29 GMT 2012
Rank385Aligned Residues151
% Identity15%Templatec3cyvA_
PDB info PDB header:lyaseChain: A: PDB Molecule:uroporphyrinogen decarboxylase; PDBTitle: crystal structure of uroporphyrinogen decarboxylase from2 shigella flexineri: new insights into its catalytic3 mechanism
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80........ .90.........100. ..
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Query Sequence  DLAMRICEHYVTVTQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQELKQTF. . . . . . . GVKIITDVHEPSQ. AQ
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Template Sequence  DKLAKSVTLYLNAQIKAGAQAVMIFDTWGG. VLTGRDYQQFS. . . . LYYMHKIVDGLLRENDGRRVPVTLFTKGGGQWLE
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   183......190.........200.........210.. .......220... ......230.........240.........250.......
 
   104.... .110.........120.........130.........140. ........150......... 160.........170......
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Query Sequence  PVADV. VDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQ. . . . . FVSPGQMGNIVDKFKEGG. NEKVILCDRGANFGYDN
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Template Sequence  AMAETGCDALGLD. . . . WTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGEGHVFNLGHGIHQDV
Template Known Secondary structure  TTS
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   258.260.........270 .........280.........290.........300.........310.........320.........330...
 
   177..180.........190.
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Query Sequence  LVVDMLGFSIMKKVS
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Template Sequence  PPEHAGVFVEAVHRL
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   334.....340........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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