Job Description P0A715 Confidence 89.11% Date Thu Jan 5 11:04:29 GMT 2012 Rank 222 Aligned Residues 221 % Identity 14% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		17	.	.	20	.	.	.	.	.	.	.													.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	P	F	V	L	F	G	G	M	N	V	.	.	.	.	.	.	.	.	.	.	.	.	L	E	S	R	D	L	A	M	R	I	C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M	K	I	F	Q	E	L
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.											.	.	.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.											.	.	.	.	.	.	.	.	.
Template Sequence		D	H	F	V	V	I	G	E	R	I	N	P	A	G	R	K	K	L	W	A	E	M	Q	K	G	N	E	E	I	V	I	K	E	A	K	T	Q	V	E	.	.	.	.	K	G	A	E	V	L	D	V	N	F	.	.	.	.	.	.	.	.	.	G	I	E	S	Q	I	D	V	R	Y	V	E	K	I	V	Q	T	L
Template Known Secondary structure		S	S											T	T										T	T															.	.	.	.	T	T		S							.	.	.	.	.	.	.	.	.	S	S	G	G	G	S
Template Predicted Secondary structure																																									.	.	.	.											.	.	.	.	.	.	.	.	.
Template SS confidence
		313	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.					.	.	.	.	.	.	.	.	360	.										.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.					.
Predicted Secondary structure																									.	.	.																	.																.	.	.															.	.	.	.
Query SS confidence																									.	.	.																	.																.	.	.															.	.	.	.
Query Sequence		K	Q	T	F	G	V	K	I	I	T	D	V	H	E	P	S	Q	A	Q	P	V	A	D	.	.	.	V	V	D	V	I	Q	L	P	A	F	L	A	R	Q	T	D	.	L	V	E	A	M	A	K	T	G	A	V	I	N	V	K	.	.	.	K	P	Q	F	V	S	P	G	Q	M	G	N	I	V	.	.	.	.	D
Query Conservation																									.	.	.																	.																.	.	.															.	.	.	.
Alig confidence																									.	.	.																	.																.	.	.															.	.	.	.
Template Conservation
Template Sequence		P	Y	V	S	N	V	P	L	S	L	D	I	Q	N	V	D	L	T	E	R	A	L	R	A	Y	P	G	R	S	L	F	N	S	A	K	V	D	E	E	E	L	E	M	K	I	N	L	L	K	K	Y	G	G	T	L	I	V	L	L	M	G	K	D	V	P	K	S	F	E	E	R	K	E	Y	F	E	K	A	L	K
Template Known Secondary structure					T		S																				S	S									S																							S		S	S	S				S
Template Predicted Secondary structure
Template SS confidence
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																					.	.
Query SS confidence																					.	.
Query Sequence		K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N	F	.	.	G	Y	D	N	L	V	V	D	M	L	G	F	S	I	M	K	K	V	S	G	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G	A	A	S	G	G	R	R	A	Q	V	A	E	L	A	R	A	G	M	A	V
Query Conservation																					.	.
Alig confidence																					.	.																		.	.																	.	.	.	.	.	.	.	.
Template Conservation																																								.	.																	.	.	.	.	.	.	.	.
Template Sequence		I	L	E	R	H	D	F	S	D	R	V	I	F	D	P	G	V	L	P	L	G	A	E	G	K	P	V	E	V	L	K	T	I	E	F	I	S	S	.	.	K	G	F	N	T	T	V	G	L	S	N	L	S	F	L	P	.	.	.	.	.	.	.	.	D	R	S	Y	Y	N	T	A	F	L	V	L	G	I	S	K
Template Known Secondary structure						T	T		T	T	S										G	G	G	T																.	.	T	T			B			B	G	G	G	T	T				.	.	.	.	.	.	.	.	S															T
Template Predicted Secondary structure																																								.	.																	.	.	.	.	.	.	.	.
Template SS confidence
		460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.			.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.									.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	A	G	L	F	I	E	A	H	P	D	P	E	H	A	K	C	D	G	P	S	A	L	P	L	A	K	L	E	P	F	L	K	Q	M	K	A	I	D	D	L	V	K	G	F	E
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.
Template Sequence		G	L	S	S	A	I	M	N	P	L	.	.	.	.	.	.	.	.	D	E	.	.	.	.	.	.	.	.	.	.	T	L	M	K	T	L	N	A	T	L	V	I	L	E	K	K	E
Template Known Secondary structure		T								T	T	.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.													T	T	S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.			.	.	.	.	.	.	.	.	.	.
Template SS confidence
		531	.	.	.	.	.	.	.	.	540									.	.											.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions