Job Description P0A715 Confidence 42.61% Date Thu Jan 5 11:04:29 GMT 2012 Rank 470 Aligned Residues 143 % Identity 12% Template c2zyfA_ PDB info PDB header:transferase Chain: A: PDB Molecule:homocitrate synthase; PDBTitle: crystal structure of homocitrate synthase from thermus thermophilus2 complexed with magnesuim ion and alpha-ketoglutarate Resolution 2.15 Å

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		102	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.			.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																.	.
Query SS confidence									.																.	.
Query Sequence		A	Q	P	V	A	D	V	.	V	D	V	I	Q	L	P	A	F	L	A	R	Q	T	D	.	.	L	V	E	A	M	A	K	T	G	A	V	I	N	V	K	K	P	Q	F	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V
Query Conservation									.																.	.
Alig confidence									.																.	.																															.	.	.	.
Template Conservation																																																									.	.	.	.
Template Sequence		A	K	A	L	D	E	F	G	I	E	Y	I	E	V	T	T	P	V	A	S	P	Q	S	R	K	D	A	E	V	L	A	S	L	G	L	K	A	K	V	V	T	H	I	Q	C	R	L	D	A	A	K	V	A	V	E	.	.	.	.	T	G	V	Q	G	I	D	L	L	F	G	T	S	K	G	R	D	I	P	R	I
Template Known Secondary structure									T		S							G	G	G														S			S	S								S											.	.	.	.	T	T		S								S
Template Predicted Secondary structure																																																									.	.	.	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.					.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		179	180			.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure				.	.
Query SS confidence				.	.
Query Sequence		V	D	.	.	M	L	G	F	S	I	M	K	K	V	S	G	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G	A	A	S	G	G	R	R	A	Q	V	A	E	L	A	R	A	G	M	A	V	G	L	A	G	L	F	I	E	A	H	P	D	P	E	H	A	K	C	D	G	P	S	A	L	P
Query Conservation				.	.
Alig confidence				.	.																									.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template Sequence		I	E	E	A	K	E	V	I	A	Y	I	R	E	A	A	P	H	V	E	V	R	F	S	A	E	D	T	F	.	.	.	.	.	.	.	.	.	.	.	R	S	E	E	Q	D	L	L	A	V	Y	E	A	V	A	P	Y	V	D	R	V	G	L	.	.	.	.	.	.	.	.	.	.	A	D	T	V	G	V	A	T
Template Known Secondary structure																	T	T	S							S	S	T	T	.	.	.	.	.	.	.	.	.	.	.	T	S													G	G	G		S					.	.	.	.	.	.	.	.	.	.			T	T	S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140												.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.											.	.	.	.	.	.	170	.
		257	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	K	L	E	P	F	L	K	Q	M	K	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	Q	V	Y	A	L	V	R	E	V	R	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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