Job Description P0A715 Confidence 96.53% Date Thu Jan 5 11:04:29 GMT 2012 Rank 57 Aligned Residues 142 % Identity 20% Template c2y0fD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27 Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	K	V	V	S	I	G	D	I	N	V	A	N	D	L	P	F	V	L	F	G	G	M	N	V	L	E	S	R	D	L	A	M	R	I	C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M	K	I	F
Query Conservation
Alig confidence					.																			.									.	.																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.
Template Conservation					.																			.									.	.																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.
Template Sequence		T	P	T	.	V	Y	V	G	R	V	P	I	G	G	A	H	P	I	A	V	Q	S	.	M	T	N	T	P	T	R	D	.	.	V	E	A	T	T	A	Q	V	L	E	L	H	R	A	G	S	E	I	V	R	.	.	.	.	.	.	.	.	L	T	V	N	D	.	.	.	.	.	.	.	E	E	A	A	K	A	V
Template Known Secondary structure					.				T	T				S	T	T	S							.				S		T	T		.	.														T	T		S				.	.	.	.	.	.	.	.					S	.	.	.	.	.	.	.					T	T
Template Predicted Secondary structure					.																			.									.	.																					.	.	.	.	.	.	.	.						.	.	.	.	.	.	.
Template SS confidence
		8	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.		.	30	.	.	.	.	.	.			.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.									.	.	.	60	.								.	.	.	.	.	.	.
		82	.	.	.	.	.						.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.						.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.																	.	.	.	.	.																																											.	.	.	.	.	.
Query SS confidence								.	.	.	.	.																	.	.	.	.	.																																											.	.	.	.	.	.
Query Sequence		Q	E	L	K	Q	T	.	.	.	.	.	F	G	V	K	I	I	T	D	V	H	E	P	S	Q	A	Q	.	.	.	.	.	P	V	A	D	V	V	D	V	I	Q	L	P	A	F	L	A	R	Q	T	D	L	V	E	A	M	A	K	T	G	A	V	I	N	V	K	K	P	Q	F	V	S	P	.	.	.	.	.	.
Query Conservation								.	.	.	.	.																	.	.	.	.	.																																											.	.	.	.	.	.
Alig confidence								.	.	.	.	.																	.	.	.	.	.																		.	.																			.					.	.	.	.	.	.
Template Conservation																																																			.	.																			.
Template Sequence		P	E	I	K	R	R	L	L	A	E	G	V	E	V	P	L	V	G	D	F	H	F	N	G	H	L	L	L	R	K	Y	P	K	M	A	E	A	L	D	K	F	R	I	N	P	E	H	F	A	.	.	E	M	I	R	I	A	M	D	L	G	K	P	V	R	I	G	A	N	.	W	G	S	L	D	P	A	L	L	T
Template Known Secondary structure											T	T										S	S																	S								T	T		.	.								T	T	T									.	G	G	G	S
Template Predicted Secondary structure																																																			.	.																			.
Template SS confidence
		69	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.
																							146	.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Q	M	G	N	I	V	D	K	F	K	E	G	.	.	.	.	.	G	N	E	K	V	I	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation
Template Sequence		E	L	M	D	R	N	A	S	R	P	E	P	K	S	A	H	E	V	V	L	E	A	L	V	E	S	A	V	R	A	Y	E	A	A	L	E	M	G	L	G	E	D	K	L	V	L
Template Known Secondary structure										S	S	S																														G	G	G
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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