Job Description P0A715 Confidence 95.56% Date Thu Jan 5 11:04:29 GMT 2012 Rank 85 Aligned Residues 119 % Identity 18% Template c2v9dB_ PDB info PDB header:lyase Chain: B: PDB Molecule:yage; PDBTitle: crystal structure of yage, a prophage protein belonging to2 the dihydrodipicolinic acid synthase family from e. coli3 k12 Resolution 2.15 Å

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		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	P	F	V	L	F	G	G	M	N	V	L	E	S	R	D	L	A	M	R	I	C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M	K	I	F	Q	E	L	K	Q	T	F	G	V	K	I	I	T	D
Query Conservation
Alig confidence																			.	.	.	.	.																		.	.	.	.	.	.	.	.						.																									.	.	.
Template Conservation																			.	.	.	.	.																		.	.	.	.	.	.	.	.						.																									.	.	.
Template Sequence		D	R	R	V	P	V	L	I	G	T	G	G	T	N	A	R	E	.	.	.	.	.	T	I	E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	.	.	.	.	.	.	.	.	V	I	N	P	Y	.	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	T	L	P	V	.	.	.
Template Known Secondary structure		T	T	S	S								S	S					.	.	.	.	.												T		S				.	.	.	.	.	.	.	.					S	.	S	S																			S	S			.	.	.
Template Predicted Secondary structure																			.	.	.	.	.																		.	.	.	.	.	.	.	.						.																									.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.						.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.									.	.	.	.	.		.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.			.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																							.	.															.
Query SS confidence																							.	.															.
Query Sequence		V	H	E	P	S	Q	A	Q	P	V	A	D	V	V	D	V	I	Q	L	P	A	.	.	F	L	A	R	Q	T	D	L	V	E	A	M	A	K	.	T	G	A	V	I	N	V	K	K	P	Q	F	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C
Query Conservation																							.	.															.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.															.											.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	X	L	Y	N	F	P	A	L	T	G	Q	D	L	T	P	A	L	V	K	T	L	A	D	S	R	S	N	I	I	G	I	K	D	T	.	I	D	S	V	A	H	L	R	S	X	I	H	T	V	K	G	A	H	P	H	F	T	V	L	C
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.										S																T	T								.		S																	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.
Template SS confidence
																143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions