Job Description P0A715 Confidence 96.24% Date Thu Jan 5 11:04:29 GMT 2012 Rank 68 Aligned Residues 196 % Identity 16% Template c2v82A_ PDB info PDB header:lyase Chain: A: PDB Molecule:2-dehydro-3-deoxy-6-phosphogalactonate aldolase; PDBTitle: kdpgal complexed to kdpgal Resolution 2.1 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
Predicted Secondary structure
Query SS confidence
Query Sequence		L	F	G	G	M	N	V	L	E	S	R	D	L	A	M	R	I	C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M	K	I	F	Q	E	L	K	Q	T	F	G	V	K	I	I	T	D	V	H	E	P	S
Query Conservation
Alig confidence														.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	I	A	I	L	R	G	I	T	P	D	E	.	.	.	.	.	A	L	A	H	V	G	A	V	I	D	A	G	F	D	A	V	E	I	.	.	.	.	.	.	.	.	.	.	.	.	P	L	N	S	P	Q	W	E	Q	S	I	P	A	I	V	D	A	Y	G	D	K	A	L	I	G	A	G	T	V	L	K	P	E
Template Known Secondary structure							T	T						.	.	.	.	.												T							.	.	.	.	.	.	.	.	.	.	.	.		T	T	S	T	T													T	T	T	S									S
Template Predicted Secondary structure														.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20						.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.													.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
		101	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.
Query SS confidence										.
Query Sequence		Q	A	Q	P	V	A	D	V	.	V	D	V	I	Q	L	P	A	F	L	A	R	Q	T	D	L	V	E	A	M	A	K	T	G	A	V	I	N	V	K	K	P	Q	F	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V	V
Query Conservation										.
Alig confidence										.									.	.	.																				.	.	.													.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation																			.	.	.																				.	.	.													.	.	.	.									.	.	.	.	.	.	.	.
Template Sequence		Q	V	D	A	L	A	R	X	G	C	Q	L	I	V	T	P	N	.	.	.	I	H	S	E	V	I	R	R	A	V	G	Y	G	X	T	V	C	P	G	.	.	.	C	A	T	A	T	E	A	F	T	A	L	E	.	.	.	.	A	G	A	Q	A	L	K	I	.	.	.	.	.	.	.	.	F	P	S	S	A	F
Template Known Secondary structure									T	T							S	S	.	.	.												T	T							.	.	.			S										.	.	.	.	T	T		S					.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																			.	.	.																				.	.	.													.	.	.	.									.	.	.	.	.	.	.	.
Template SS confidence
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.				.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.				.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.									.	.	130	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure														.
Query SS confidence														.
Query Sequence		D	M	L	G	F	S	I	M	K	K	V	S	.	G	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G	A	A	S	G	G	R	R	A	Q	V	A	E	L	A	R	A	G	M	A	V	G	L	A	G	L	F	I	E	A	H	P	D	P	E	H	A	K	C	D	G	P	S	A	L	P	L	A
Query Conservation														.
Alig confidence														.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.																									.	.	.									.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.																									.	.	.									.
Template Sequence		G	P	Q	Y	I	K	A	L	K	A	V	L	P	S	D	I	A	V	F	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	G	V	T	.	.	.	P	E	N	L	A	Q	W	I	D	A	G	C	A	G	A	G	L	G	S	D	L	Y	R	A	.	.	.	G	Q	S	V	E	R	T	A	.	Q
Template Known Secondary structure											T	T	S		T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		S	S			.	.	.	T	T	T								T		S						T	T	T			T	.	.	.	T								.
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						.	.	.																									.	.	.									.
Template SS confidence
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.																.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.				.	.	.	.	.	.	.	190		.
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	E	P	F	L	K	Q	M	K	A	I	D	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	A	A	F	V	K	A	Y	R	E	A	V	Q	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions