Job Description P0A715 Confidence 92.79% Date Thu Jan 5 11:04:29 GMT 2012 Rank 171 Aligned Residues 209 % Identity 17% Template c2qygC_ PDB info PDB header:unknown function Chain: C: PDB Molecule:ribulose bisphosphate carboxylase-like protein 2; PDBTitle: crystal structure of a rubisco-like protein rlp2 from rhodopseudomonas2 palustris Resolution 3.30 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.																				.	.	.	.	.	.
Query SS confidence																																																						.	.	.																				.	.	.	.	.	.
Query Sequence		G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M	K	I	F	Q	E	L	K	Q	T	F	G	V	K	I	I	T	D	V	H	E	P	S	.	.	.	Q	A	Q	P	V	A	D	V	V	D	V	I	Q	L	P	A	F	L	A	.	.	.	.	.	.
Query Conservation																																																						.	.	.																				.	.	.	.	.	.
Alig confidence															.												.	.																										.	.	.																				.	.	.	.	.	.
Template Conservation															.												.	.
Template Sequence		G	I	P	L	I	R	L	Q	D	I	R	F	P	.	E	P	Y	L	A	A	F	D	G	P	R	.	.	F	G	I	A	G	V	R	E	R	L	Q	A	F	D	R	P	I	F	F	G	V	I	K	P	N	I	G	L	P	P	Q	P	F	A	E	L	G	Y	Q	S	W	T	G	G	L	D	I	A	K	D	D	E	M
Template Known Secondary structure		T													.					T	T	S				S	.	.	S										T			S	S								S	S		T	T			S														T		S						T	T
Template Predicted Secondary structure															.												.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.		.	140	.	.	.	.	.	.	.	.	.			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
			120	.	.	.															.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure		.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	R	Q	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	E	A	M	A	K	T	G	A	V	I	N	V	K	K	P	Q	F	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V	V	D	M	L	G	F
Query Conservation		.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.
Template Sequence		L	A	D	V	D	W	C	P	L	A	E	R	A	A	L	L	G	D	A	C	R	R	A	S	A	E	T	G	V	P	K	I	Y	L	A	N	I	T	D	E	V	D	R	L	T	E	L	H	D	V	A	V	A	N	G	A	G	A	L	L	I	.	.	.	.	.	.	.	.	.	N	A	M	P	V	G	L	S	A	V
Template Known Secondary structure				S		T	T	S																					S	S												T	T												T	T							.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.										.	.	.	.	.	.	270	.	.	.
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	M	K	K	V	S	G	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G	A	A	S	G	G	R	R	A	Q	V	A	E	L	A	R	A	G	M	A	V	G	L	A	G	L	F	I	E	A	H	P	D	P	E	H	A	K	C	D	G	P	S	A	L	P	L	A	K	L	E	P	F	L
Query Conservation
Alig confidence									.					.	.	.																							.	.																			.	.	.	.	.	.	.	.
Template Conservation									.					.	.	.																							.	.																			.	.	.	.	.	.	.	.
Template Sequence		R	M	L	R	K	H	A	.	T	V	P	L	.	.	.	I	A	H	F	P	F	I	A	A	F	S	R	L	A	N	Y	G	I	H	S	R	V	.	.	M	T	R	L	Q	R	L	A	G	F	D	V	V	I	M	P	G	F	.	.	.	.	.	.	.	.	G	P	R	M	M	T	P	E	H	E	V	L	D	C	I
Template Known Secondary structure						T	T		.		S			.	.	.					T	T						S		T	T	S							.	.									T		S							S	.	.	.	.	.	.	.	.	S	G	G	G
Template Predicted Secondary structure									.					.	.	.																							.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		274	.	.	.	.	.	280		.	.	.	.				.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.			.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.									.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	M	K	A	I	D	D	L	V	K	G	F	E	E	L	D	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	C	L	E	P	M	G	P	I	K	P	C	L	P	V	P	G	G
Template Known Secondary structure						S		B	T	T	B									S
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions