Job Description P0A715 Confidence 77.18% Date Thu Jan 5 11:04:29 GMT 2012 Rank 313 Aligned Residues 86 % Identity 20% Template c2qsjB_ PDB info PDB header:transcription Chain: B: PDB Molecule:dna-binding response regulator, luxr family; PDBTitle: crystal structure of a luxr family dna-binding response2 regulator from silicibacter pomeroyi Resolution 2.10 Å

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		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	I	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V	V	D	M	L	G	F	S	I	M	K	K	V	S	G	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G	A	A	S	G	G	R	R	A	Q	V	A	E	L	A	R	A	G
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	D	A	L	A	F	L	E	A	D	N	T	V	D	L	I	L	L	.	.	.	.	.	.	.	.	.	.	.	D	V	A	I	D	G	L	V	R	L	K	R	F	D	P	S	N	A	V	A	L	I	S	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	E	L	I	R	A	A
Template Known Secondary structure										T	T				S					.	.	.	.	.	.	.	.	.	.	.															T	T	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.												.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.																				80	.	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	V	G	L	A	G	L	F	I	E	A	H	P	D	P	E	H	A	K	C	D	G	P	S	A	L	P	L	A	K	L	E	P	F	L	K	Q	M	K	A	I	D	D	L	V	K	G	F	E
Query Conservation
Alig confidence									.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	A	G	A	D	G	.	F	I	P	K	S	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	P	Q	V	L	I	H	A	V	S	L	I	L	E	G	E	I	F	L	P	R	S	Y
Template Known Secondary structure				T	T		S	B	.				T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	S														T	T			B			S
Template Predicted Secondary structure									.						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.		.	.	.	.	.														.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions