Job Description P0A715 Confidence 50.65% Date Thu Jan 5 11:04:29 GMT 2012 Rank 429 Aligned Residues 133 % Identity 10% Template c2qq6B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing enzyme- PDBTitle: crystal structure of mandelate racemase/muconate2 lactonizing enzyme-like protein from rubrobacter3 xylanophilus dsm 9941 Resolution 2.90 Å

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.																																			60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	I	C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	F	K	A	S	F	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M	K	I	F
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	E	Y	I	A	V	A	R	E	A	V	E	R	G	F	D	A	I	K	L	D	V	D	D	I	T	G	P	L	H	R	D	F	W	N	G	A	I	S	P	R	E	H	E	A	X	V	A	R	V	A	A	V	R	E	A	V	G	P	E	V	E	V	A	I	D	X	H	G	R	F	D	I	P	S	S	I	R	F	A
Template Known Secondary structure														T	T		S									T	T	S	T	T		S		S	S	S																								S	S	S							T	T
Template Predicted Secondary structure
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.																				.	.
Query SS confidence																																				.	.	.																				.	.
Query Sequence		Q	E	L	K	Q	T	F	G	V	K	I	I	T	D	V	H	E	P	S	Q	A	Q	P	V	A	D	V	V	D	V	I	Q	L	P	.	.	.	A	F	L	A	R	Q	T	D	L	V	E	A	M	A	K	T	G	A	V	.	.	I	N	V	K	K	P	Q	F	V	S	P	G	Q	M	G	N	I	V	D	K	F	K
Query Conservation																																				.	.	.																				.	.
Alig confidence				.																																.	.	.																				.	.
Template Conservation				.
Template Sequence		R	A	.	X	E	P	F	G	L	L	W	L	E	E	P	T	P	P	E	N	L	D	A	L	A	E	V	R	R	S	T	S	T	P	I	C	A	G	E	N	V	Y	T	R	F	D	F	R	E	L	F	A	K	R	A	V	D	Y	V	X	P	D	V	A	K	C	G	G	L	A	E	A	K	R	I	A	N	L	A	E
Template Known Secondary structure				.		G	G	G	T		S						S		S	S										T	T		S	S						T	T														T			S										T
Template Predicted Secondary structure				.
Template SS confidence
		229	230		.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	G	G	N	E	K	V	I	L	C	D	R	G	A	N
Query Conservation
Alig confidence							.	.
Template Conservation							.	.
Template Sequence		L	D	Y	I	P	.	.	F	A	P	H	N	V	S	S
Template Known Secondary structure			T	T			.	.	B
Template Predicted Secondary structure							.	.
Template SS confidence
		308	.	310	.	.			.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions