Job Description P0A715 Confidence 95.92% Date Thu Jan 5 11:04:29 GMT 2012 Rank 76 Aligned Residues 186 % Identity 15% Template c2ftpA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of hydroxymethylglutaryl-coa lyase from pseudomonas2 aeruginosa Resolution 2.40 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	V	L	E	S	R	D	L	A	M	R	I	C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M	K	I	F	Q	E	L	K	Q	T	F	G	V	K	I	I	T	D	V	H	E	P	S	Q	A	Q	P
Query Conservation
Alig confidence																					.	.	.	.															.						.	.	.	.	.	.
Template Conservation																					.	.	.	.															.						.	.	.	.	.	.
Template Sequence		E	K	Q	P	I	E	V	A	D	K	I	R	L	V	D	D	L	S	A	.	.	.	.	A	G	L	D	Y	I	E	V	G	S	F	V	S	P	.	K	W	V	P	Q	.	.	.	.	.	.	M	A	G	S	A	E	V	F	A	G	I	R	Q	R	P	G	V	T	Y	A	A	L	A	P	N	L	K	G	F	E	A
Template Known Secondary structure		S	S	S																	.	.	.	.	T	T		S								S		T	.	T	T		G	G	.	.	.	.	.	.	G	T	T								S				T	T	S								S
Template Predicted Secondary structure																					.	.	.	.															.						.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.							.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		105	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.																		.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.									.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query SS confidence						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Query Sequence		V	A	D	V	.	V	D	V	I	Q	L	P	A	F	L	A	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	D	L	V	E	A	M	A	K	T	G	A	V	I	N	V	K	K	P	Q	F	.	.	.	.	.	.	.	.	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G
Query Conservation						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Alig confidence						.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	L	E	S	G	V	K	E	V	A	V	F	A	A	A	S	E	A	F	S	Q	R	N	I	N	C	S	I	K	D	S	L	E	R	F	V	P	V	L	E	A	A	R	Q	H	Q	V	R	V	R	G	Y	I	S	C	V	L	G	C	P	Y	D	G	D	V	D	P	R	Q	V	A	W	V	A	R	E	L	Q	Q	M
Template Known Secondary structure					T	T										S										S	S																			T	T										T	T		B	T	T	T	B																	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V	V	D	M	L	G	F	S	I	M	K	K	V	S	G	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G	A	A	S	G	G	R	R	A	Q	V	A	E	L	A	R	A	G	M	A	V	G	L	A	G	L	F	I
Query Conservation
Alig confidence											.	.	.																													.						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation											.	.	.																													.						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		G	C	Y	E	V	S	L	G	D	.	.	.	T	I	G	V	G	T	A	G	A	T	R	R	L	I	E	A	V	A	S	E	V	P	R	E	R	L	A	G	.	H	F	H	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	Q	A	L	A	N	I	Y	A	S	L	L	E	G	I	A	.	.	V	F
Template Known Secondary structure		T		S							.	.	.	S	S	S															T	T	T	S		G	G	G				.			B		T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S												T	T			.	.
Template Predicted Secondary structure											.	.	.																													.						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.														.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.			.	230
		239	240
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		231	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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