Job Description P0A715 Confidence 88.99% Date Thu Jan 5 11:04:29 GMT 2012 Rank 224 Aligned Residues 210 % Identity 14% Template c2d69B_ PDB info PDB header:lyase Chain: B: PDB Molecule:ribulose bisphosphate carboxylase; PDBTitle: crystal structure of the complex of sulfate ion and octameric2 ribulose-1,5-bisphosphate carboxylase/oxygenase (rubisco) from3 pyrococcus horikoshii ot3 (form-2 crystal) Resolution 1.90 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																						.	.	.																				.	.	.	.	.	.
Query SS confidence																																																						.	.	.																				.	.	.	.	.	.
Query Sequence		G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M	K	I	F	Q	E	L	K	Q	T	F	G	V	K	I	I	T	D	V	H	E	P	S	.	.	.	Q	A	Q	P	V	A	D	V	V	D	V	I	Q	L	P	A	F	L	A	.	.	.	.	.	.
Query Conservation																																																						.	.	.																				.	.	.	.	.	.
Alig confidence															.												.	.																										.	.	.																				.	.	.	.	.	.
Template Conservation															.												.	.
Template Sequence		A	L	K	N	L	R	L	L	D	F	H	P	P	.	Y	E	Y	L	R	H	F	K	G	P	Q	.	.	F	G	V	Q	G	I	R	E	F	M	G	V	K	D	R	P	L	T	A	T	V	P	K	P	K	M	G	W	S	V	E	E	Y	A	E	I	A	Y	E	L	W	S	G	G	I	D	L	L	K	D	D	E	N
Template Known Secondary structure		T													.					T	T					S	.	.	S										T			S	S								S	S	S	S																		T		S						T	T
Template Predicted Secondary structure															.												.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
			120	.	.	.															.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
Predicted Secondary structure		.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	R	Q	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	E	A	M	A	K	T	G	A	V	I	N	V	K	K	P	Q	F	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V	V	D	M	L	G	F
Query Conservation		.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.
Template Sequence		F	T	S	F	P	F	N	R	F	E	E	R	V	R	K	L	Y	R	V	R	D	R	V	E	A	E	T	G	E	T	K	E	Y	L	I	N	I	T	G	P	V	N	I	M	E	K	R	A	E	M	V	A	N	E	G	G	Q	Y	V	M	I	.	.	.	.	.	.	.	.	.	D	I	V	V	A	G	W	S	A	L
Template Known Secondary structure					B	T	T	B																					S	S							B			S	S														T	T							.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.										.	.	.	.	.	.	.	.	260	.
		185	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure										.	.
Query SS confidence										.	.
Query Sequence		S	I	M	K	K	V	S	G	.	.	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G	A	A	S	G	G	R	R	A	Q	V	A	E	L	A	R	A	G	M	A	V	G	L	A	G	L	F	I	E	A	H	P	D	P	E	H	A	K	C	D	G	P	S	A	L	P	L	A	K	L	E	P
Query Conservation										.	.
Alig confidence										.	.					.	.	.																							.	.																			.	.	.	.	.	.	.	.
Template Conservation																.	.	.																							.	.																			.	.	.	.	.	.	.	.
Template Sequence		Q	Y	M	R	E	V	T	E	D	L	G	L	A	I	.	.	.	H	A	H	R	A	M	H	A	A	F	T	R	N	P	R	H	G	I	T	M	L	A	.	.	L	A	K	A	A	R	M	I	G	V	D	Q	I	H	T	G	T	A	.	.	.	.	.	.	.	.	V	G	K	M	A	G	N	Y	E	E	I	K	R
Template Known Secondary structure												T				.	.	.					T	T	T					S		T	T	S							.	.									T		S								.	.	.	.	.	.	.	.		S	S
Template Predicted Secondary structure																.	.	.																							.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.				.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.			.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.									.	.	.	.	320	.	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	K	Q	M	K	A	I	D	D	L	V	K	G	F	E	E	L	D	T	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N	D	F	L	L	S	K	W	E	H	I	R	P	V	F	P	V	A	S	G
Template Known Secondary structure								S		B	T	T	B									S
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions