Job Description P0A715 Confidence 90.70% Date Thu Jan 5 11:04:29 GMT 2012 Rank 208 Aligned Residues 185 % Identity 11% Template c2cw6B_ PDB info PDB header:lyase Chain: B: PDB Molecule:hydroxymethylglutaryl-coa lyase, mitochondrial; PDBTitle: crystal structure of human hmg-coa lyase: insights into2 catalysis and the molecular basis for3 hydroxymethylglutaric aciduria Resolution 2.10 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	V	L	E	S	R	D	L	A	M	R	I	C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M	K	I	F	Q	E	L	K	Q	T	F	G	V	K	I	I	T	D	V	H	E	P	S	Q	A	Q	P
Query Conservation
Alig confidence																					.	.	.	.															.						.	.	.	.	.	.
Template Conservation																					.	.	.	.															.						.	.	.	.	.	.
Template Sequence		E	K	N	I	V	S	T	P	V	K	I	K	L	I	D	M	L	S	E	.	.	.	.	A	G	L	S	V	I	E	T	T	S	F	V	S	P	.	K	W	V	P	Q	.	.	.	.	.	.	M	G	D	H	T	E	V	L	K	G	I	Q	K	F	P	G	I	N	Y	P	V	L	T	P	N	L	K	G	F	E	A
Template Known Secondary structure			S	S																	.	.	.	.	T	T		S										T	.	T	T		G	G	.	.	.	.	.	.	G	T	T								S				T	T		B							S
Template Predicted Secondary structure																					.	.	.	.															.						.	.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.					.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.							.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		105	.	.	.		.	110	.	.	.	.																		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.									.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure						.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query SS confidence						.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Query Sequence		V	A	D	V	.	V	D	V	I	Q	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	A	F	L	A	R	Q	T	D	L	V	E	A	M	A	K	T	G	A	V	I	N	V	K	K	P	Q	F	.	.	.	.	.	.	.	.	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G
Query Conservation						.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Alig confidence						.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	V	A	A	G	A	K	E	V	V	I	F	G	A	A	S	E	L	F	T	K	K	N	I	N	C	S	I	E	E	S	F	Q	R	F	D	A	I	L	K	A	A	Q	S	A	N	I	S	V	R	G	Y	V	S	C	A	L	G	C	P	Y	E	G	K	I	S	P	A	K	V	A	E	V	T	K	K	F	Y	S	M
Template Known Secondary structure					T	T		S								S									T	S	S		T	T	T															T	T									S	T	T		B	T	T	T	B	S																T
Template Predicted Secondary structure
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V	V	D	M	L	G	F	S	I	M	K	K	V	S	G	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G	A	A	S	G	G	R	R	A	Q	V	A	E	L	A	R	A	G	M	A	V	G	L	A	G	L	F	I
Query Conservation
Alig confidence											.	.	.																													.						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation											.	.	.																													.						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		G	C	Y	E	I	S	L	G	D	.	.	.	T	I	G	V	G	T	P	G	I	M	K	D	M	L	S	A	V	M	Q	E	V	P	L	A	A	L	A	V	.	H	C	H	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	G	Q	A	L	A	N	T	L	M	A	L	Q	M	G	V	S	.	.	V	V
Template Known Secondary structure		T		S							.	.	.	T	T																			S		G	G	G				.			B		T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S												T	T			.	.
Template Predicted Secondary structure											.	.	.																													.						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		196	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.														.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.			.	.
		239
Predicted Secondary structure
Query SS confidence
Query Sequence		E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		257

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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