Return to main results Retrieve Phyre Job Id

Job DescriptionP0A715
Confidence50.84%DateThu Jan 5 11:04:29 GMT 2012
Rank428Aligned Residues126
% Identity15%Templatec2cu0B_
PDB info PDB header:oxidoreductaseChain: B: PDB Molecule:inosine-5'-monophosphate dehydrogenase; PDBTitle: crystal structure of inosine-5'-monophosphate dehydrogenase from2 pyrococcus horikoshii ot3
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   88.90.........100........ .110.........120.........130 .........140.........150.........160..
Predicted Secondary structure 




.





....












Query SS confidence 




















.





















. . . .































Query Sequence  FGVKIITDVHEPSQAQPVADV. VDVIQLPAFLARQTDLVEAMAK. . . . TGAVINVKKPQFVSPGQMGNIVDKFKEGGNEK
Query Conservation   

   

  
      
   .
   



    
 


   
 .... 








   
  

  

  
   

  
Alig confidence 




















.





















....










..







......




Template Conservation                      
    
 
             
  
      


 
 
 ..    
   ......  
  
Template Sequence  LLVAAAVSPFDIKRAIELDKAGVDVIVVDTAHAHNLKAIKSMKEMRQKVDADFIVGNIA. . NPKAVDDL. . . . . . TFADA
Template Known Secondary structure  B


TT
TT
S
S



TT

S
..
TT......TTSS
Template Predicted Secondary structure 
























..
......



Template SS confidence 















































































   219220.........230.........240.........250.........260.........270....... ..280..... ....290
 
   163.. ....170.........180 .........190.. .......200.........210.........220.........230.....
Predicted Secondary structure  .









....

..
























Query SS confidence 


.














. . . .











. .










































Query Sequence  VIL. CDRGANFGYDNLVVD. . . . MLGFSIMKKVSG. . NSPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGLAG
Query Conservation 
 
.  
 
 

      
....
  
  
     ..  


 
 

      
 
    
    
     



 

 
Alig confidence 


.














....











..











.................













Template Conservation 
 
   

           
 
    
  
        




 


  .................
 

 








Template Sequence  VKVGIGPGSICTTRIVAGVGVPQITAVAMVADRAQEYGLYVIADGGIRY. . . . . . . . . . . . . . . . . SGDIVKAIAAGADA
Template Known Secondary structure 
SS
STTB
T




T
S


S.................TT
S
Template Predicted Secondary structure 



























.................



Template SS confidence 















































































   291........300.........310.........320.........330......... 340.........350...
 
   236..
Predicted Secondary structure 
Query SS confidence 


Query Sequence  LFI
Query Conservation   

Alig confidence 


Template Conservation 
 
Template Sequence  VML
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 


   354..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions