Job Description P0A715 Confidence 87.57% Date Thu Jan 5 11:04:29 GMT 2012 Rank 240 Aligned Residues 168 % Identity 14% Template c1znnF_ PDB info PDB header:biosynthetic protein Chain: F: PDB Molecule:plp synthase; PDBTitle: structure of the synthase subunit of plp synthase Resolution 2.20 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.			.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.
Predicted Secondary structure																																																												.	.												.
Query SS confidence																																																												.	.												.
Query Sequence		H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M	K	I	F	Q	E	L	K	Q	T	F	G	V	K	I	I	T	D	V	H	.	.	E	P	S	Q	A	Q	P	V	A	D	V	.	V	D	V	I	Q	L	P	A
Query Conservation																																																												.	.												.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																																	.	.												.			.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Template Sequence		E	Q	A	K	I	A	E	A	A	G	A	V	A	V	.	.	.	.	.	.	.	.	.	.	.	.	M	A	L	E	G	G	V	A	R	M	A	D	P	T	V	I	E	E	V	M	N	A	V	S	I	P	V	M	A	K	V	R	I	G	H	Y	V	E	A	R	V	L	E	A	L	G	V	D	.	.	Y	I	D	E
Template Known Secondary structure										T	T		S			.	.	.	.	.	.	.	.	.	.	.	.										S														S	S								T	T											T	T		S	.	.
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.													.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90			.	.	.	.
		117	.	.	120	.	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.																							.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure															.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	L	A	R	Q	T	D	L	V	E	A	M	A	.	K	T	G	A	V	I	N	V	K	K	P	Q	F	V	S	P	G	Q	M	G	N	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N	F	G
Query Conservation															.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.														.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.
Template Sequence		S	E	V	L	T	P	A	D	E	E	F	H	I	D	K	R	Q	F	T	V	P	F	V	C	G	C	R	.	D	L	G	E	A	A	R	R	I	A	E	G	A	S	M	L	R	T	K	G	E	P	G	T	G	N	I	V	E	A	V	R	H	M	R	K	V	N	A	Q	I	R	K	V	V	N	M	S	E	D	E	L
Template Known Secondary structure			T	T	S			S		S	S					G	G	G		S	S							S	.	S										T	T		S								T	T	S	S																						S		G	G	G
Template Predicted Secondary structure																													.
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		174	.				.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.
Query SS confidence				.	.	.
Query Sequence		Y	D	.	.	.	N	L	V	V	D	M	L	G	F	S	I	M	K	K	V	S	G	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G	A	A	S	G	G	R	R	A	Q	V	A	E	L	A	R	A	G	M	A	V	G	L	A	G	L	F	I
Query Conservation				.	.	.
Alig confidence				.	.	.																								.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template Sequence		V	A	E	A	K	Q	L	G	A	P	V	E	V	L	R	E	I	K	R	L	G	R	L	P	V	V	N	F	.	.	.	.	.	.	.	.	.	.	A	A	G	G	V	T	T	.	.	.	.	.	.	P	A	D	A	A	L	M	M	H	L	G	A	D	G	V	F	V
Template Known Secondary structure									T													T	S		S	S				.	.	.	.	.	.	.	.	.	.			S	S			S	.	.	.	.	.	.										T	T		S
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.								.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210											.	.	.	.	.	.	.							.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions