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Job DescriptionP0A715
Confidence100.00%DateThu Jan 5 11:04:29 GMT 2012
Rank12Aligned Residues248
% Identity28%Templatec1zcoA_
PDB info PDB header:lyaseChain: A: PDB Molecule:2-dehydro-3-deoxyphosphoheptonate aldolase; PDBTitle: crystal structure of pyrococcus furiosus 3-deoxy-d-arabino-2 heptulosonate 7-phosphate synthase
Resolution2.25 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  QKVVSIGDINVANDLPFVLFGGMNVLESRDLAMRICEHYVTVTQKLGIPYVFKASFDKANRSSIHSYRGPGLEEGMKIFQ
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Template Sequence  KTVVKINDVKFGE. . GFTIIAGPCSIESREQIMKVAEFLAE. . . . VGIKVLRGGAFKP. . RTSPYSFQGYG. EKALRWMR
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TTTS..S

SB


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   10.........20.. .......30.........40........ .50.........60. ........70.. .......80
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  ELKQTFGVKIITDVHEPSQAQPVADVVDVIQLPAFLARQTDLVEAMAKTGAVINVKKPQFVSPGQMGNIVDKFKEGGNEK
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Template Sequence  EAADEYGLVTVTEVMDTRHVELVAKYSDILQIGARNSQNFELLKEVGKVENPVLLKRGMGNTIQELLYSAEYIMAQGNEN
Template Known Secondary structure  T



GGG
S
GGGTT
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TTT


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   81........90.........100.........110.........120.........130.........140.........150.........160
 
   163.... ..170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  VILCD. . RGANFGYDNLVVDMLGFSIMKKVSGNSPVIFDVTHALQCRDPFGAASGGRRAQVAELARAGMAVGLAGLFIEA
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Template Sequence  VILCERGIRTFETATRFTLDISAVPVVKELS. HLPIIVDPSHPA. . . . . . . . . . . GRRSLVIPLAKAAYAIGADGIMVEV
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B

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   161........170.........180.........190. ........200... ......210.........220........
 
   241........250.........260.........270.
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Query Sequence  HPDPEHAKCDGPSALPLAKLEPFLKQMKAID
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Template Sequence  HPEPEKALSDSQQQLTFDDFLQLLKELEALG
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SSGGG
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   229230.........240.........250.........
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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