Job Description P0A715 Confidence 84.67% Date Thu Jan 5 11:04:29 GMT 2012 Rank 268 Aligned Residues 185 % Identity 15% Template c1ydnA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydroxymethylglutaryl-coa lyase; PDBTitle: crystal structure of the hmg-coa lyase from brucella melitensis,2 northeast structural genomics target lr35. Resolution 2.30 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	N	V	L	E	S	R	D	L	A	M	R	I	C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M	K	I	F	Q	E	L	K	Q	T	F	G	V	K	I	I	T	D	V	H	E	P	S	Q	A	Q	P
Query Conservation
Alig confidence																					.	.	.	.															.						.	.	.	.	.	.
Template Conservation																					.	.	.	.															.						.	.	.	.	.	.
Template Sequence		E	K	R	F	V	P	T	A	D	K	I	A	L	I	N	R	L	S	D	.	.	.	.	C	G	Y	A	R	I	E	A	T	S	F	V	S	P	.	K	W	V	P	Q	.	.	.	.	.	.	L	A	D	S	R	E	V	X	A	G	I	R	R	A	D	G	V	R	Y	S	V	L	V	P	N	X	K	G	Y	E	A
Template Known Secondary structure		S	S	S															T	T	.	.	.	.	T	T		S								S		T	.	T	T		G	G	.	.	.	.	.	.	G	T	T								S				S	S	S							S	S
Template Predicted Secondary structure																					.	.	.	.															.						.	.	.	.	.	.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.							.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		105	.															.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130					.	.	.	.	.	.	.	.	.	140	.	.									.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.													.	.	.	.	.	.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.													.	.	.	.	.	.	.	.
Query Sequence		V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	V	D	V	I	Q	L	P	A	F	L	A	R	Q	T	D	L	V	E	A	M	A	K	.	.	.	.	T	G	A	V	I	N	V	K	K	P	Q	F	.	.	.	.	.	.	.	.	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.													.	.	.	.	.	.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.													.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	A	A	H	A	D	E	I	A	V	F	I	S	A	S	E	G	F	S	K	A	N	I	N	C	T	I	A	E	S	I	E	R	L	S	P	V	I	G	A	A	I	N	D	G	L	A	I	R	G	Y	V	S	C	V	V	E	C	P	Y	D	G	P	V	T	P	Q	A	V	A	S	V	T	E	Q	L	F	S	L
Template Known Secondary structure					T	T		S								S									T	S	S																			T	T										S	S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V	V	D	M	L	G	F	S	I	M	K	K	V	S	G	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G	A	A	S	G	G	R	R	A	Q	V	A	E	L	A	R	A	G	M	A	V	G	L	A	G	L	F	I
Query Conservation
Alig confidence											.	.	.																													.						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Conservation											.	.	.																													.						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template Sequence		G	C	H	E	V	S	L	G	D	.	.	.	T	I	G	R	G	T	P	D	T	V	A	A	X	L	D	A	V	L	A	I	A	P	A	H	S	L	A	G	.	H	Y	H	D	T	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	R	A	L	D	N	I	R	V	S	L	E	K	G	L	R	.	.	V	F
Template Known Secondary structure		T		S							.	.	.	T	T	S																T	T	S		G	G	G				.			B		T	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S													T			.	.
Template Predicted Secondary structure											.	.	.																													.						.	.	.	.	.	.	.	.	.	.	.	.	.																		.	.
Template SS confidence
		168	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.														210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.			.	.
		239
Predicted Secondary structure
Query SS confidence
Query Sequence		E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		229

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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