Job Description P0A715 Confidence 100.00% Date Thu Jan 5 11:04:29 GMT 2012 Rank 6 Aligned Residues 257 % Identity 13% Template c1xuzA_ PDB info PDB header:biosynthetic protein Chain: A: PDB Molecule:polysialic acid capsule biosynthesis protein siac; PDBTitle: crystal structure analysis of sialic acid synthase (neub)from2 neisseria meningitidis, bound to mn2+, phosphoenolpyruvate, and n-3 acetyl mannosaminitol Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																																											.	.	.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.	.	.
Query Sequence		Q	K	V	V	S	I	G	D	I	N	V	A	N	D	L	P	F	V	L	F	G	G	M	N	V	L	E	S	R	D	L	A	M	R	I	C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	.	.	.	.	.	.	.
Query Conservation																																																																											.	.	.	.	.	.	.
Alig confidence																																.	.																																										.	.	.	.	.	.	.
Template Conservation																																.	.
Template Sequence		N	N	E	F	K	I	G	N	R	S	V	G	Y	N	H	E	P	L	I	I	C	E	I	G	I	N	H	E	G	S	.	.	L	K	T	A	F	E	M	V	D	A	A	Y	N	A	G	A	E	V	V	K	H	Q	T	H	I	V	E	D	E	M	S	D	E	A	K	Q	V	I	P	G	N	A	D	V	S	I	Y	E
Template Known Secondary structure								T	T					T	T	S										T	T	T	T	T		.	.															T		S															G	G	G	G	G				T	T		S	S
Template Predicted Secondary structure																																.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
											76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																		.
Query SS confidence		.	.	.	.	.	.	.	.	.																																		.
Query Sequence		.	.	.	.	.	.	.	.	.	E	G	M	K	I	F	Q	E	L	K	Q	T	F	G	V	K	I	I	T	D	V	H	E	P	S	Q	A	Q	P	V	A	D	V	.	V	D	V	I	Q	L	P	A	F	L	A	R	Q	T	D	L	V	E	A	M	A	K	T	G	A	V	I	N	V	K	K	P	Q	F	V	S	P
Query Conservation		.	.	.	.	.	.	.	.	.																																		.
Alig confidence		.	.	.	.	.	.	.	.	.																																		.																																			.
Template Conservation																																																																															.
Template Sequence		I	M	E	R	C	A	L	N	E	E	D	E	I	K	L	K	E	Y	V	E	S	K	G	M	I	F	I	S	T	P	F	S	R	A	A	A	L	R	L	Q	R	M	D	I	P	A	Y	K	I	G	S	G	E	C	N	N	Y	P	L	I	K	L	V	A	S	F	G	K	P	I	I	L	S	T	G	M	N	.	S	I
Template Known Secondary structure																							T	T									S											T		S						G	G	G	T	T										T	T		S							T	T		.
Template Predicted Secondary structure																																																																															.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	M	G	N	I	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V	V	D	M	L	G	F	S	I	M	K	K	V	S	G	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G	A	A	S	G	G	R	R	A	Q	V	A	E	L	A
Query Conservation
Alig confidence																	.																																				.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Conservation																	.																																				.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template Sequence		E	S	I	K	K	S	V	E	I	I	R	E	A	G	V	.	P	Y	A	L	L	H	C	T	N	I	Y	P	T	P	Y	E	D	V	R	L	G	G	M	N	D	L	S	E	A	F	P	D	A	I	I	.	.	.	.	.	.	.	.	.	.	.	.	G	L	S	D	H	T	L	D	.	.	.	.	.	N	Y	A	C
Template Known Secondary structure															T		.											S	S								T	T										T	T	S			.	.	.	.	.	.	.	.	.	.	.	.						S	S	S	.	.	.	.	.	S
Template Predicted Secondary structure																	.																																				.	.	.	.	.	.	.	.	.	.	.	.									.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210													.	.	.	.	.	.	.	.						.	220	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.
Predicted Secondary structure																									.	.
Query SS confidence																									.	.
Query Sequence		R	A	G	M	A	V	G	L	A	G	L	F	I	E	A	H	P	D	P	E	H	A	K	.	.	C	D	G	P	S	A	L	P	L	A	K	L	E	P	F	L	K	Q	M	K	A	I	D	D	L	V	K	G	F	E	E	L	D	T
Query Conservation																									.	.
Alig confidence											.	.													.	.
Template Conservation											.	.
Template Sequence		L	G	A	V	A	L	G	G	S	.	.	I	L	E	R	H	F	T	D	R	M	D	R	P	G	P	D	I	V	C	S	M	N	P	D	T	F	K	E	L	K	Q	G	A	H	A	L	K	L	A	R	G	G	K	K	D	T	I	I
Template Known Secondary structure								T			.	.						B		S		T	T			S	T	T	G	G	G		B																			S	S			T	T
Template Predicted Secondary structure											.	.
Template SS confidence
		223	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions