Job Description P0A715 Confidence 62.10% Date Thu Jan 5 11:04:29 GMT 2012 Rank 375 Aligned Residues 236 % Identity 13% Template c1rcxH_ PDB info PDB header:lyase (carbon-carbon) Chain: H: PDB Molecule:ribulose bisphosphate carboxylase/oxygenase; PDBTitle: non-activated spinach rubisco in complex with its substrate2 ribulose-1,5-bisphosphate Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.					.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.																		.	.	.	.
Query SS confidence																													.																		.	.	.	.
Query Sequence		K	V	V	S	I	G	D	I	N	V	A	N	D	L	P	F	V	L	F	G	G	M	N	V	L	E	S	.	R	D	L	A	M	R	I	C	E	H	Y	V	T	V	T	Q	K	.	.	.	.	L	G	I	P	Y	V	F	K	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M
Query Conservation																													.																		.	.	.	.
Alig confidence																													.			.	.		.	.											.	.	.	.															.												.	.
Template Conservation																																.	.		.	.																													.												.	.
Template Sequence		R	C	Y	H	I	E	P	V	A	G	E	E	N	Q	Y	I	C	Y	V	A	Y	P	L	D	L	F	E	E	G	S	.	.	V	.	.	T	N	M	F	T	S	I	V	G	N	V	F	G	F	K	A	L	R	A	L	R	L	E	D	L	R	I	P	.	V	A	Y	V	K	T	F	Q	G	P	P	.	.	H	G	I
Template Known Secondary structure										T	T		S	S										G	G	G	S		T	T		.	.		.	.								T	S	S	G	G	G		T	T													.					T	T	S				S	.	.	S
Template Predicted Secondary structure																																.	.		.	.																													.												.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.			.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.			.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100				.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.								120	.	.	.															.	.	.	.	.	.	130	.	.	.	.
Predicted Secondary structure																								.	.	.																				.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.																				.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	I	F	Q	E	L	K	Q	T	F	G	V	K	I	I	T	D	V	H	E	P	S	.	.	.	Q	A	Q	P	V	A	D	V	V	D	V	I	Q	L	P	A	F	L	A	.	.	.	.	.	.	.	R	Q	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	V	E	A	M	A	K	T	G	A	V
Query Conservation																								.	.	.																				.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																								.	.	.																				.	.	.	.	.	.	.					.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	V	E	R	D	K	L	N	K	Y	G	R	P	L	L	G	C	T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	V	Y	E	C	L	R	G	G	L	D	F	T	K	D	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	L	F	C	A	E	A	L	Y	K	A	Q	A	E	T	G	E	I
Template Known Secondary structure									T			S	S						B		S	S	S	S																	T	T		S						T	T		S	S	B	T	T	B																					S	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		135	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.			.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
Predicted Secondary structure										.																																																			.	.
Query SS confidence										.																																																			.	.
Query Sequence		I	N	V	K	K	P	Q	F	.	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N	F	G	Y	D	N	L	V	V	D	M	L	G	F	S	I	M	K	K	V	S	G	.	.	N	S	P	V	I	F	D	V	T	H	A	L	Q	C	R	D	P	F	G
Query Conservation										.																																																			.	.
Alig confidence										.																								.	.	.	.	.	.	.	.	.																			.	.					.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.																									.	.	.
Template Sequence		K	G	H	Y	L	N	A	T	A	G	T	C	E	D	M	M	K	R	A	V	F	A	R	E	L	G	V	P	I	V	M	H	.	.	.	.	.	.	.	.	.	D	Y	L	T	G	G	F	T	A	N	T	T	L	S	H	Y	C	R	D	N	G	L	L	L	.	.	.	H	I	H	R	A	M	H	A	V	I	D	R
Template Known Secondary structure											S	S															T		S					.	.	.	.	.	.	.	.	.																					T				.	.	.					T	T						S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.																									.	.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.										.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.				.	.	.	.	.	.	.	.	300	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	S	G	G	R	R	A	Q	V	A	E	L	A	R	A	G	M	A	V	G	L	A	G	L	F	I	E	A	H	P	D	P	E	H	A	K	C	D	G	P	S	A	L	P	L	A	K	L	E	P	F	L	K	Q	M	K
Query Conservation
Alig confidence												.	.																			.	.	.	.	.	.	.	.
Template Conservation												.	.																			.	.	.	.	.	.	.	.
Template Sequence		Q	K	N	H	G	M	H	F	R	V	.	.	L	A	K	A	L	R	L	S	G	G	D	H	I	H	S	G	T	V	.	.	.	.	.	.	.	.	V	G	K	L	E	G	E	R	D	I	T	L	G	F	V	D	L	L	R
Template Known Secondary structure			S	S	S							.	.											S							S	.	.	.	.	.	.	.	.	S	S	S	S
Template Predicted Secondary structure												.	.																			.	.	.	.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.			.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.									.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions