Job Description P0A715 Confidence 39.08% Date Thu Jan 5 11:04:29 GMT 2012 Rank 484 Aligned Residues 136 % Identity 13% Template c1jpmB_ PDB info PDB header:isomerase Chain: B: PDB Molecule:l-ala-d/l-glu epimerase; PDBTitle: l-ala-d/l-glu epimerase Resolution 2.25 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Query Sequence		R	I	C	E	H	Y	V	T	V	T	Q	K	L	G	I	P	Y	V	F	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	S	F	D	K	A	N	R	S	S	I	H	S	Y	R	G	P	G	L	E	E	G	M	K	I	F	Q	E	L	K	Q	.	T	F	G	V	K	I	I	T	D	V
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation
Template Sequence		E	E	M	A	A	D	A	E	N	Y	L	K	Q	G	F	Q	T	L	K	I	K	V	G	K	D	D	I	A	T	D	I	A	R	I	Q	E	I	R	K	R	V	G	S	A	V	K	L	R	L	D	A	N	Q	G	W	R	P	K	E	A	V	T	A	I	R	K	M	E	D	A	G	L	G	I	E	L	V	E	Q	P
Template Known Secondary structure														T	T									S	S	S																	G	G	G	S							T	T		S															T	T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.				.	.	120	.	.	.	.	.	.	.	.	.	130	.	.			.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure																							.	.	.																.	.
Query SS confidence																							.	.	.																.	.
Query Sequence		H	E	P	S	Q	A	Q	P	V	A	D	V	V	D	V	I	Q	L	P	A	F	.	.	.	L	A	R	Q	T	D	L	V	E	A	M	A	K	T	G	.	.	A	V	I	N	V	K	K	P	Q	F	V	S	P	G	Q	M	G	N	I	V	D	K	F	K	E	G	G	N	E	K	V	I	L	C	D	R	G	A	N
Query Conservation																							.	.	.																.	.
Alig confidence																							.	.	.																.	.																														.	.
Template Conservation																																																																								.	.
Template Sequence		V	H	K	D	D	L	A	G	L	K	K	V	T	D	A	T	D	T	P	I	M	A	D	E	S	V	F	T	P	R	Q	A	F	E	V	L	Q	T	R	S	A	D	L	I	N	I	K	L	M	K	A	G	G	I	S	G	A	E	K	I	N	A	M	A	E	A	C	G	V	E	.	.	C	M	V	G	S	M	I	E
Template Known Secondary structure		S		T	T													S	S					S	T	T		S	S											T			S										T	S														T	T			.	.						S	S
Template Predicted Secondary structure																																																																								.	.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.
		172	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		300	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions