Job Description P0A9K1 Confidence 98.30% Date Wed Jan 25 15:20:20 GMT 2012 Rank 40 Aligned Residues 136 % Identity 17% Template c3ly5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx18; PDBTitle: ddx18 dead-domain Resolution 2.80 Å

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		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.						.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																				.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.
Query Sequence		P	I	L	A	R	N	E	A	Q	L	H	Y	L	K	A	I	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	D	V	D	.	.	.	.	.	R	I	I	V	T	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K
Query Conservation																																																				.	.	.	.	.
Alig confidence																																																				.	.	.	.	.																.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		G	F	T	N	M	T	E	I	Q	H	K	S	I	R	P	L	L	E	G	R	D	L	L	A	A	A	K	T	G	S	G	K	T	L	A	F	L	I	P	A	V	E	L	I	V	K	L	R	F	M	P	R	N	G	T	G	V	L	I	L	S	P	T	R	E	L	A	M	Q	T	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T			B															T									T	T	S																	T	T			G	G	G									S	S								.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.															.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.							.	.	.	.	.	.	.	.		270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.									.											.	.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.									.											.	.
Query Sequence		F	A	P	Y	F	R	P	V	Y	D	V	L	V	R	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	A	S	F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	F	A	Y	.	.	.	.	.	.	M	R	G	R	T	F	E	N	.	A	V	V	I	L	D	E	A	Q	N	.	.
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.									.											.	.
Alig confidence		.	.	.	.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.									.											.	.
Template Conservation		.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	F	G	V	L	K	E	L	M	T	H	H	V	H	T	Y	G	L	I	M	G	G	S	N	R	S	A	E	A	Q	K	L	G	N	G	I	N	I	I	V	A	T	P	G	R	L	L	D	H	M	Q	N	T	P	G	F	M	Y	K	N	L	Q	C	L	V	I	D	E	A	D	R	I	L
Template Known Secondary structure		.	.	.	.	.	.	.	.								T	T	T			S							S	S	S														S																	T	T				T	T								S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.
Template SS confidence
										268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
				280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	V	T	A	A	Q	M	K	M	F	L	T	R	L	G	E	N	V	T	V	I	V	N
Query Conservation		.	.
Alig confidence		.	.
Template Conservation
Template Sequence		D	V	G	F	E	E	E	L	K	Q	I	I	K	L	L	P	T	R	R	Q	T	M	L	F
Template Known Secondary structure			T	T												S		S	S	S
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions