40 c3ly5A_ Probab=98.30   E-value=6.9e-05  Score=51.34  Aligned_columns=136  Identities=17%

Q ss_pred             CCCCCCHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCC-----EEEEECCCHHHHHHCCCCCCCHHHH
Q ss_conf             86758999999999611384699975898608899999999999819965-----8999737816653134467998999
Q batch____       148 PILARNEAQLHYLKAIESKQLIFATGEAGCGKTWISAAKAAEALIHKDVD-----RIIVTRPVLQADEDLGFLPGDIAEK  222 (354)
Q Consensus       148 pi~prn~~Q~~yl~Ai~s~~LV~i~GpAGTGKTlLAla~al~~L~~~~~~-----kIIItRPtV~agedLGfLPGdl~EK  222 (354)
                      .+.--+.-|..++.++.+.+=|++.+|+|+|||+..+-.+++.+......     +.++..|+.+....+          
T Consensus        23 g~~~~~~~Q~~ai~~ll~g~~viv~a~tgsGKT~~~~l~~l~~l~~~~~~~~~~~~~iii~P~~~L~~q~----------   92 (211)
T c3ly5A_          23 GFTNMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPAVELIVKLRFMPRNGTGVLILSPTRELAMQT----------   92 (211)
T ss_dssp             TCCBCCHHHHHHHHHHHHTCCCEECCCTTSCHHHHHHHHHHHHHHHTTCCGGGCCCEEEECSSHHHHHHH----------
T ss_pred             CCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHH----------
T ss_conf             8998898999999999679979999779972258999999999973000013587427971530328999----------


Q ss_pred             HHHHHHHHHHHHHHH--------------CCCCHHHHHHHHCCCCEEEEECHH------HCCCCCCC-CEEEEECCCC--
Q ss_conf             999999999999986--------------295267888641258589963122------06887566-4899966132--
Q batch____       223 FAPYFRPVYDVLVRR--------------LGASFMQYCLRPEIGKVEIAPFAY------MRGRTFEN-AVVILDEAQN--  279 (354)
Q Consensus       223 l~P~l~pi~D~L~~l--------------l~~~~~~~~~~~~~g~IEi~play------iRGRTL~n-~~IIIDEAQN--  279 (354)
                              ++.+..+              ................+-..|-.+      .....+.+ .++|+||+-.  
T Consensus        93 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~tp~~l~~~l~~~~~~~~~~l~~iViDE~~~l~  164 (211)
T c3ly5A_          93 --------FGVLKELMTHHVHTYGLIMGGSNRSAEAQKLGNGINIIVATPGRLLDHMQNTPGFMYKNLQCLVIDEADRIL  164 (211)
T ss_dssp             --------HHHHHHHTTTCCSCEEEECSSSCHHHHHHHHHHCCSEEEECHHHHHHHHHHCTTCCCTTCCEEEECSHHHHH
T ss_pred             --------HHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCCCCEEEEEEHHHHC
T ss_conf             --------999999864539606888733771588884027882798466899999961253200542189973058832


Q ss_pred             --CCHHHHHHHHHHCCCCCEEEEE
Q ss_conf             --9999999999848898789997
Q batch____       280 --VTAAQMKMFLTRLGENVTVIVN  301 (354)
Q Consensus       280 --lt~~emK~iLTRiGenSKIVl~  301 (354)
                        --.+.++.++.+++++.++|++
T Consensus       165 ~~~~~~~~~~i~~~l~~~~q~v~~  188 (211)
T c3ly5A_         165 DVGFEEELKQIIKLLPTRRQTMLF  188 (211)
T ss_dssp             HTTCHHHHHHHHHHSCSSSEEEEE
T ss_pred             CCCHHHHHHHHHHHCCCCCCEEEE
T ss_conf             458699999999975999979999