Job Description P0A9K1 Confidence 94.18% Date Wed Jan 25 15:20:20 GMT 2012 Rank 338 Aligned Residues 128 % Identity 21% Template c1vciA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sugar-binding transport atp-binding protein; PDBTitle: crystal structure of the atp-binding cassette of multisugar2 transporter from pyrococcus horikoshii ot3 complexed with3 atp Resolution 2.90 Å

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		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.
Query SS confidence																																										.	.	.	.
Query Sequence		I	E	S	K	Q	L	I	F	A	T	G	E	A	G	C	G	K	T	W	I	S	A	A	K	A	A	E	A	L	I	H	K	D	V	D	R	I	I	V	T	.	.	.	.	R	P	V	L	Q	A	D	E	D	L	G	F	L	P	G	D	I	A	E	K	F	A	P	Y	F	R	P	V	Y	D	V	L	V	R	R	L
Query Conservation																																										.	.	.	.
Alig confidence																							.	.																		.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation																							.	.																																								.	.	.	.	.	.	.	.	.
Template Sequence		I	K	D	G	E	F	L	V	L	L	G	P	S	G	C	G	K	T	T	T	L	.	.	R	M	I	A	G	L	E	E	P	T	E	G	R	I	Y	F	G	D	R	D	V	T	Y	L	P	P	K	D	R	N	I	S	M	V	F	Q	H	M	T	.	.	.	.	.	.	.	.	.	V	Y	E	N	I	A	F	P	L
Template Known Secondary structure				T	T									T	T	S	S						.	.					T	S	S			S							T	T				T	T	S		G	G	G	T	T										.	.	.	.	.	.	.	.	.							T	T
Template Predicted Secondary structure																							.	.																																								.	.	.	.	.	.	.	.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.			.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.										.	.	.	.	.	100	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.																				.	.	270	.	.	.	.	.	.		.	.	.	280	.	.				.	.	.	.	.	.	.	290	.	.			.
Predicted Secondary structure																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.							.	.	.											.	.
Query SS confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.							.	.	.											.	.
Query Sequence		G	A	S	F	M	Q	Y	C	L	R	P	E	I	G	K	V	E	I	A	P	F	A	Y	M	R	G	R	T	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	N	A	V	V	I	L	D	E	.	A	Q	N	V	T	A	.	.	.	A	Q	M	K	M	F	L	T	R	L	.	.	G
Query Conservation																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.							.	.	.											.	.
Alig confidence																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.							.	.	.											.	.
Template Conservation
Template Sequence		K	K	F	P	K	D	E	I	D	K	R	V	R	W	A	A	E	L	L	Q	I	E	E	L	L	N	R	Y	P	A	Q	L	S	G	G	Q	R	Q	R	V	A	V	A	R	A	I	V	V	E	P	D	V	L	L	M	D	E	P	L	S	N	L	D	A	K	L	R	V	A	M	R	A	E	I	K	K	L	Q	Q	K
Template Known Secondary structure																				T	T		G	G	G	T	T			G	G	G			S	S												T	T			S						S	T	T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		294	.	.	.	.	.	300	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	N	V	T	V	I	V	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	K	V	T	T	I	Y	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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