338 c1vciA_ Probab=94.18   E-value=0.11  Score=30.92  Aligned_columns=128  Identities=21%

Q ss_pred             HCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEE----CCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             1138469997589860889999999999981996589997----378166531344679989999999999999999862
Q batch____       163 IESKQLIFATGEAGCGKTWISAAKAAEALIHKDVDRIIVT----RPVLQADEDLGFLPGDIAEKFAPYFRPVYDVLVRRL  238 (354)
Q Consensus       163 i~s~~LV~i~GpAGTGKTlLAla~al~~L~~~~~~kIIIt----RPtV~agedLGfLPGdl~EKl~P~l~pi~D~L~~ll  238 (354)
                      +...+++.+.|+-|+|||.+.  ..+.-+..-..-+|.+-    .-.-+-...+|+.+....         +++++....
T Consensus        29 i~~Ge~~~l~G~nGsGKsTll--~~l~g~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~---------~~~n~~~~~   97 (353)
T c1vciA_          29 IKDGEFLVLLGPSGCGKTTTL--RMIAGLEEPTEGRIYFGDRDVTYLPPKDRNISMVFQHMT---------VYENIAFPL   97 (353)
T ss_dssp             ECTTCEEEEECCTTSSHHHHH--HHHHTSSCCSEEEEEETTEECTTSCGGGTTEEEECCCCC---------HHHHHHTTC
T ss_pred             ECCCCEEEEECCCCCCHHHHH--HHHHCCCCCCCCEEEECCEECCCCCHHHCEEECCCCCCE---------EEECCCCCC
T ss_conf             889978999879998888999--999668747600799888887457832302202333200---------000121121


Q ss_pred             CCCHHHHHHHHCCCCEEEEECHHHCCCCC-------------------CCCEEEEEC-CCCCCH---HHHHHHHHHC--C
Q ss_conf             95267888641258589963122068875-------------------664899966-132999---9999999848--8
Q batch____       239 GASFMQYCLRPEIGKVEIAPFAYMRGRTF-------------------ENAVVILDE-AQNVTA---AQMKMFLTRL--G  293 (354)
Q Consensus       239 ~~~~~~~~~~~~~g~IEi~playiRGRTL-------------------~n~~IIIDE-AQNlt~---~emK~iLTRi--G  293 (354)
                      ..........+....++..-+....++..                   +-.++|+|| .+++++   .++...|.++  .
T Consensus        98 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~LSgGq~qrv~iaral~~~p~llllDEP~s~LD~~~~~~~~~~l~~~~~~  177 (353)
T c1vciA_          98 KKFPKDEIDKRVRWAAELLQIEELLNRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQK  177 (353)
T ss_dssp             CCCCHHHHHHHHHHHHHHTTCGGGTTCCGGGCCSSCHHHHHHHHHHTTCCSEEEEESTTTTSCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHCCHHHHHHHHHCCCCEEECCCCEECCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             00001100002578763138510110252035766157688889850786599995610198889999999999999997


Q ss_pred             CCCEEEEE
Q ss_conf             98789997
Q batch____       294 ENVTVIVN  301 (354)
Q Consensus       294 enSKIVl~  301 (354)
                      .+..+|++
T Consensus       178 ~g~tvi~v  185 (353)
T c1vciA_         178 LKVTTIYV  185 (353)
T ss_dssp             HCCEEEEE
T ss_pred             CCCEEEEE
T ss_conf             39824677