Job Description P75914 Confidence 40.25% Date Thu Jan 5 12:15:58 GMT 2012 Rank 96 Aligned Residues 215 % Identity 15% Template d4ubpc2 SCOP info TIM beta/alpha-barrel Metallo-dependent hydrolases alpha-subunit of urease, catalytic domain Resolution 1.55

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.			.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																				.	.
Query SS confidence																																																				.	.
Query Sequence		P	V	D	L	H	M	H	T	V	A	S	T	H	A	Y	S	T	L	S	D	Y	I	A	Q	A	K	Q	K	G	I	K	L	F	A	I	T	D	H	G	P	D	M	E	D	A	P	H	H	W	H	.	.	F	I	N	M	R	I	W	P	R	V	V	D	G	V	G	I	L	R	G	I	E	A	N	I	K	N	V	D
Query Conservation																																																				.	.
Alig confidence													.	.	.	.	.	.	.	.																																.	.
Template Conservation													.	.	.	.	.	.	.	.
Template Sequence		G	I	D	T	H	V	H	F	I	N	P	.	.	.	.	.	.	.	.	D	Q	V	D	V	A	L	A	N	G	I	T	T	L	F	G	G	G	T	G	P	A	E	G	S	K	A	T	T	V	T	P	G	P	W	N	I	E	K	M	L	K	S	T	E	G	L	P	I	N	V	G	I	L	G	K	G	H	G	S	S
Template Known Secondary structure												T	.	.	.	.	.	.	.	.	T								T	T										S	S							S	S																T	T		S	S					B						S	S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.									.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	I	D	C	S	G	K	M	F	D	S	L	D	L	I	I	A	G	F	H	E	P	V	F	A	P	H	D	K	A	T	N	T	Q	A	M	I	A	T	I	A	S	G	N	V	H	I	I	S	H	P	G	N	P	K	Y	E	I	D	V	K	A	V	A	E	A	A	A	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.																																																.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.
Template Sequence		I	A	P	I	M	E	Q	I	D	A	G	A	A	G	L	.	.	.	.	.	.	.	I	H	E	D	W	G	A	T	P	A	S	I	D	R	S	L	T	V	A	D	E	A	D	V	Q	V	A	I	H	S	D	T	L	N	E	A	G	F	L	E	D	T	L	R	A	I	N	G	R	V	I	H	S	F	H	V	E	G
Template Known Secondary structure												T			B		.	.	.	.	.	.	.		B	G	G	G																		T		B				B			T	T		S	S											T	T						T	T	T	T	S
Template Predicted Secondary structure																	.	.	.	.	.	.	.
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.								220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
															150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.																														170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	K	H	Q	V	A	L	E	I	N	N	S	S	F	L	H	S	R	K	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	D	N	C	R	E	V	A	A	A	V	R	D	A	G	G	W	V
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	G	G	G	H	A	P	D	I	M	A	M	A	G	H	P	N	V	L	P	S	S	T	N	P	T	R	P	F	T	V	N	T	I	D	E	H	L	D	M	L	M	V	C	H	H	L	K	Q	N	I	P	E	D	V	A	F	A	D	S	R	I	R	P	E	T	I	A	A	E	D	I	L	H	D	L	G	I	I	S
Template Known Secondary structure		T	T	S	S	S	T	T	T	G	G	G	G	G	G	S	T	T				B			S	T	T	S	S		B	T	T														T			T	T	S											S														T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.
		188	.	190	.	.	.			.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.
Predicted Secondary structure								.	.								.	.	.
Query SS confidence								.	.								.	.	.
Query Sequence		A	L	G	S	D	S	.	.	H	T	A	F	T	M	G	.	.	.	E	F	E	E	C	L	K	I	L	D	A	V	D	F	P	P	E	R	I	L	N	V	S	P	R	R	L	L	N	F	L	E
Query Conservation								.	.								.	.	.
Alig confidence								.	.								.	.	.
Template Conservation
Template Sequence		M	M	S	T	D	A	L	A	M	G	R	A	G	E	M	V	L	R	T	W	Q	T	A	D	K	M	K	K	Q	R	G	P	L	A	E	E	K	N	G	S	D	N	F	R	L	K	R	Y	V	S
Template Known Secondary structure		B					B	T	T	S	S		T	T																			S		T	T			S	S
Template Predicted Secondary structure
Template SS confidence
		359	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions