Job Description P75914 Confidence 42.88% Date Thu Jan 5 12:15:58 GMT 2012 Rank 92 Aligned Residues 182 % Identity 11% Template c3si9B_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from bartonella2 henselae Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure														.	.	.																																													.
Query SS confidence														.	.	.																																													.
Query Sequence		T	V	A	S	T	H	A	Y	S	T	L	S	.	.	.	D	Y	I	A	Q	A	K	Q	K	G	I	K	L	F	A	I	T	D	H	G	P	D	M	E	D	A	P	H	H	W	H	F	I	N	M	R	I	W	P	R	V	V	D	G	.	V	G	I	L	R	G	I	E	A	N	I	K	N	V	D	G	E	I	D	C
Query Conservation														.	.	.																																													.
Alig confidence														.	.	.																																													.
Template Conservation
Template Sequence		T	P	F	D	D	N	G	A	I	D	E	K	A	F	C	N	F	V	E	W	Q	I	T	Q	G	I	N	G	V	S	P	V	G	T	T	G	E	S	P	T	L	T	H	E	E	H	K	R	I	I	E	L	C	V	E	Q	V	A	K	R	V	P	V	V	A	G	A	G	S	N	S	T	S	E	A	V	E	L	A	K
Template Known Secondary structure				B		T	T	S		B															T	T		S					S	S	T	T	T	T	G	G	G																		T	T	S	S		B							S	S
Template Predicted Secondary structure
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	K	M	F	D	S	L	D	L	I	I	A	G	F	H	E	P	V	F	A	P	H	D	K	A	T	N	T	Q	A	M	I	A	T	I	A	S	G	N	V	H	I	I	S	H	P	G	N	P	K	Y	E	I	D	V	K	A	V	A	E	A	A	A	K	H	Q	V	A	L	E	I	N	N	S	S	F	L	H	S
Query Conservation
Alig confidence																																						.																																				.	.	.	.	.	.
Template Conservation																																						.																																				.	.	.	.	.	.
Template Sequence		H	A	E	K	A	G	A	D	A	V	L	V	V	T	P	Y	Y	N	R	P	N	Q	R	G	L	Y	T	H	F	S	S	I	A	K	A	I	.	S	I	P	I	I	I	Y	N	I	P	S	R	S	V	I	D	M	A	V	E	T	M	R	D	L	C	R	D	F	K	N	I	I	G	V	.	.	.	.	.	.	K	D
Template Known Secondary structure						T	T		S									S	S																			.	S	S												S	S															T	T					.	.	.	.	.	.
Template Predicted Secondary structure																																						.																																				.	.	.	.	.	.
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130		.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.							.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	G	S	E	D	N	C	R	E	V	A	A	A	V	R	D	A	G	G	W	V	A	L	G	S	D	S	H	T	A	F	T	M
Query Conservation
Alig confidence																			.
Template Conservation																			.
Template Sequence		A	T	G	K	I	E	R	A	S	E	Q	R	E	K	C	G	K	.	D	F	V	Q	L	S	G	D	D	C	T	A	L	G	F	N
Template Known Secondary structure			S			T												T	.	T	S					S		T	T	T
Template Predicted Secondary structure																			.
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions