Job Description P75914 Confidence 94.15% Date Thu Jan 5 12:15:58 GMT 2012 Rank 35 Aligned Residues 230 % Identity 17% Template c3msrA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:amidohydrolases; PDBTitle: the crystal structure of an amidohydrolase from mycoplasma synoviae Resolution 2.16 Å

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		3	.	.	.	.	.	.													10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	V	D	L	H	M	H	.	.	.	.	.	.	.	.	.	.	.	.	T	V	A	S	T	H	A	Y	S	T	L	S	D	Y	I	A	Q	A	K	Q	K	G	I	K	L	F	A	I	T	D	H	G	P	D	M	E	D	A	P	H	H	W	H	F	I	N	M	R	I	W	P	R	V	V	D	G	V	G	I	L	R
Query Conservation									.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.																																																		.	.	.	.
Template Conservation																																																																						.	.	.	.
Template Sequence		I	T	D	C	H	D	H	F	I	K	N	G	G	P	E	V	E	E	H	I	D	F	L	X	L	N	V	D	A	S	I	K	E	F	K	E	F	I	D	R	G	G	S	T	I	V	T	X	D	P	P	N	V	G	R	D	V	L	K	T	L	E	I	A	N	A	V	K	.	.	.	.	N	L	G	G	N	V	I	X
Template Known Secondary structure									S		B		S	S							G	G	G		B																T	T										T	T	T	T														G	.	.	.	.	G	G	T
Template Predicted Secondary structure																																																																						.	.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.					.	.	90	.	.	.	.	.
		71	.	.	.	.	.	.	.																															.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	I	E	A	N	I	K	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	D	G	E	I	D	C	S	G	K	M	F	D	S	L	D	L	I	I	A	G	F	H	E	P	V	F	A	P	H	D	K	A	T	N	T	Q	A	M	I	A	T
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	T	G	F	H	K	A	K	F	Y	D	K	Y	S	S	W	L	A	V	V	P	T	E	E	I	V	K	X	C	V	A	E	I	E	E	G	X	D	E	Y	N	Y	N	G	P	V	V	K	R	S	K	A	K	A	G	I	I	K	A	G	T	G	Y	G	A	I	D	R	L	E	L	K	A	L	E	V	A	A	R	T
Template Known Secondary structure								G	G	G	S		T	T	T	S					S															T			B	T	T	T	T	S	S	S				B		S											B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
		121	.	.	.	.	.	.	.	.	130	.	.																										.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	S	G	N	V	H	I	I	S	H	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	P	K	Y	E	I	D	V	K	A	V	A	E	A	A	A	K	H	Q	V	A	L	E	I	N	N	S	S	F	L	H	S	R	K	G	S	E	D	N	C	R	E
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																								.	.
Template Conservation																																																																														.	.
Template Sequence		S	I	L	T	G	C	P	I	L	V	H	T	Q	L	G	T	X	A	L	E	V	A	K	H	L	I	G	F	G	A	N	P	D	K	I	Q	I	S	H	L	N	K	N	P	D	K	Y	Y	Y	E	K	V	I	K	E	T	G	V	T	L	C	F	D	G	P	D	R	V	K	Y	Y	P	D	S	L	L	.	.	A	E
Template Known Secondary structure														G	G	G		S												T			G	G	G						G	G	G	S																						T	T		T	T	T							.	.
Template Predicted Secondary structure																																																																														.	.
Template SS confidence
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.
		176	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Query SS confidence												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Query Sequence		V	A	A	A	V	R	D	A	G	G	.	.	W	V	A	L	G	S	D	S	H	T	A	F	T	M	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	E	E	C	L	K	I	L	D	A	V	D	F	P	P	E	R	I	L	N	V	.	.	.	S	P	R	R	L	L	N	F	L	E	S	R	G
Query Conservation												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Alig confidence												.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.	.	.
Template Conservation
Template Sequence		N	I	K	Y	L	V	D	K	G	L	Q	K	H	I	T	L	S	L	D	A	G	R	I	L	Y	Q	R	N	Y	G	L	T	K	G	K	Q	T	F	G	L	A	Y	L	F	D	R	F	L	P	L	L	K	Q	V	G	V	S	K	E	A	I	F	D	I	L	V	N	N	P	K	R	V	L	A	F	D	E	K	R	N
Template Known Secondary structure									T	T		G	G	G									S	G	G	G	S							T	T						T						T									T											T							T	S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.
		236	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	D	P
Template Known Secondary structure				G
Template Predicted Secondary structure
Template SS confidence
		334	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions