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Job DescriptionP75914
Confidence84.85%DateThu Jan 5 12:15:58 GMT 2012
Rank60Aligned Residues214
% Identity14%Templatec3e2vA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:3'-5'-exonuclease; PDBTitle: crystal structure of an uncharacterized amidohydrolase from2 saccharomyces cerevisiae
Resolution1.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MYPVDLHMHTVAS. THAY. . . . . . . . STLSDYIAQAKQKGIKLFAITDHGPDMEDAPHHWHFINMRIWPRVVD. . GVGIL
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Template Sequence  LKYYDIGLNLTDPMFHGIYNGKQYHPADYVKLLERAAQRHVKNALVTGS. . . . . . . SIAESQSAIELVSSVKDLSPLKLY
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TTSGGGGTTT
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   36...40.........50.........60.........70.........80.... .....90.........100........
 
   70......... 80.........90.........100......... 110.....
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Query Sequence  RGIEANIKNV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . DGEIDCSGKMFDSLDLIIAGFHEPVFAPHD. . . . . KATNTQ
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Template Sequence  HTIGVHPCCVNEFAEAYNESLYAKVISNPSFAQGKLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRFHYSSKEMQKVFFE
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GGGGGGG


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STT
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   109110.........120.........130.........140.........150.........160.........170.........180........
 
   116...120. ........130.. .......140.......
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Query Sequence  AMIATI. . . . ASGNVHIISHP. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GNPKYEIDVKAVAEA
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Template Sequence  EQLKISCLNDKLSSYPLFLHMRSACDDFVQILERFVVGFTDEKDTFQLQKLSSSSGFYKFHPDRKLVVHSFTGSAIDLQK
Template Known Secondary structure  TTSSTS
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   207..210.........220.........230.........240.........250.........260.........270.........280......
 
   148.150. ........160.........170.........180..... ....190.....
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Query Sequence  AAKH. . QVALEINNSSFLHSRKGSEDNCREVAAAVRDAGG. WVALGSDSHT. . . . . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  LLNLSPNIFIGVN. . . . . . . . . GCSLRTEENLAVVKQIPTERLLLETDAPWCEIKRTHASFQYLAKYQEVRDFEYPAFKS
Template Known Secondary structure 
TT
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   289290.........300. ........310.........320.........330.........340.........350.........
 
   196...200.........210.. .......220.........230
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Query Sequence  . . . . . . . . . . . . . . . . . . . . AFTMGEFEECLKILDAV. DFPPERILNVSPRRLLNF
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Template Sequence  VKKNKLADKLNAEELYMVKGRNEPCNMEQVAIVVSEVKDVDLATLIDTTWKTTCKI
Template Known Secondary structure 
GGGSGGGTTSSS
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GGGT

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   360.........370.........380.........390.........400.........410.....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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