Return to main results Retrieve Phyre Job Id

Job DescriptionP75914
Confidence23.59%DateThu Jan 5 12:15:58 GMT 2012
Rank145Aligned Residues170
% Identity15%Templatec2ehhE_
PDB info PDB header:lyaseChain: E: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 aquifex aeolicus
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   20.........30.........40.........50.........60.... .....70.........80.........90........
Predicted Secondary structure 















.













Query SS confidence 












































.

































Query Sequence  LSDYIAQAKQKGIKLFAITDHGPDMEDAPHHWHFINMRIWPRVVD. GVGILRGIEANIKNVDGEIDCSGKMFDSLDLIIA
Query Conservation   

 
  
   
   





                        .

 
  
 
                       
 
Alig confidence 












































.

































Template Conservation         
   

 

   




   

 


  
             

 

   
    
  
  
   


 
   
Template Sequence  LGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVV
Template Known Secondary structure  TTT
SSSTTTTGGGS
TTSS


S
TT
S
Template Predicted Secondary structure 

























Template SS confidence 















































































   23......30.........40.........50.........60.........70.........80.........90.........100..
 
   99100.........110.........120.........130.........140.........150.........160.........170........
Predicted Secondary structure 



































Query SS confidence 















































































Query Sequence  GFHEPVFAPHDKATNTQAMIATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQVALEINNSSFLHSRKGSEDNCREVAA
Query Conservation                           
   




                       


                    
Alig confidence 






















.


































.........











Template Conservation 

         
      
    .  




  
  

   
   
  
    
 



.........
 
  
      
Template Sequence  VPYYNKPTQRGLYEHFKTVAQEV. DIPIIIYNIPSRTCVEISVDTMFKLASECENIVAS. . . . . . . . . KESTPNMDRISE
Template Known Secondary structure 


SS



.
S

S




TT.........

S
Template Predicted Secondary structure 








.
















.........




Template SS confidence 















































































   103......110.........120..... ....130.........140.........150.........160 .........170..
 
   179180... ......190.........
Predicted Secondary structure 
..






Query SS confidence 




. .















Query Sequence  AVRDA. . GGWVALGSDSHTAFTM
Query Conservation   
   ..
     




     
Alig confidence 




..















Template Conservation            
  
 
      
Template Sequence  IVKRLGESFSVLSGDDSLTLPMM
Template Known Secondary structure  S
TT
S
GGG
Template Predicted Secondary structure 





Template SS confidence 






















   173......180.........190.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions