 |
Job Description | Q47690 | Confidence | 38.11% | Date | Thu Jan 5 12:37:05 GMT 2012 |
Rank | 105 | Aligned Residues | 73 |
% Identity | 12% | Template | d1vbga1 |
SCOP info | TIM beta/alpha-barrel
| Phosphoenolpyruvate/pyruvate domain
| Pyruvate phosphate dikinase, C-terminal domain
|
Resolution | 2.30 |
|
 |
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | A | F | H | R | P | R | V | E | A | L | L | D | A | G | A | D | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | A | C | E | T | L | P | N | F | S | E | I | E | A | L | A | E | L | L | T | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | P | R | A | R | A | W | F | S | F | T | L | R | D | S | E | H | L | S | D |
Query Conservation |   |
  |   |   |   |   |   |
|
|   |   |
|   |   |   |
|
|
|   | . | . | . | . | . | . | . | . | . | . |
|   |   |
|
|   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|   |   |
|
|   |   |   |   |   |   |
|   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
Template Conservation |   |
|   |
|
|   |   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |
|
|
|   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |   | . |
Template Sequence |   |
P | E | L | T | E | M | Q | A | R | A | I | F | E | A | A | I | A | M | T | N | Q | G | V | Q | V | F | P | E | I | M | V | P | L | V | G | T | P | Q | E | L | G | H | Q | V | T | L | I | R | Q | V | A | E | K | V | F | A | N | V | G | K | T | I | G | Y | K | V | G | T | M | I | E | I | P | R | A | A | L | V | A | . |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|  |  |  |  |  |  |
| S |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|
|  |  |  |  |  |  |
| S |  |  |  |  |  | T |  | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | |
  |
  |   |
206 | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | T | P | L | R | D | V | V | A | L | L | A | G | Y | P | Q | V | V | A | L | G | I | N |
Query Conservation |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
Alig confidence |   |
. | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . | . |
|   |
|
|   |   |   |
|
|   |
|
|
|
|
|
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
D | E | I | A | E | Q | A | E | F | F | S | F | G | T | N |
Template Known Secondary structure |   |
. | . | . | . | . | . | . | . |  |  |  | T | T | T |
| S |  |  |  |  |
|  |  |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |
|  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
|
759 | 760 | . | . | . | . | . | . | . | . | . | 770 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|