Job Description Q47690 Confidence 100.00% Date Thu Jan 5 12:37:05 GMT 2012 Rank 4 Aligned Residues 249 % Identity 26% Template d1lt7a_ SCOP info TIM beta/alpha-barrel Homocysteine S-methyltransferase Homocysteine S-methyltransferase Resolution 2.15

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	A	L	L	D	K	Q	D	I	L	L	L	D	G	A	M	A	T	E	L	E	A	R	G	C	N	L	A	D	S	L	W	S	A	K	V	L	V	E	N	P	E	L	I	R	E	V	H	L	D	Y	Y	R	A	G	A	Q	C	A	I	T	A	S	Y	Q	A	T	P	A	G	F	A	A	R	G	L	D	E	A
Query Conservation
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	E	R	L	N	A	G	E	I	V	I	G	D	G	G	F	V	F	A	L	E	K	R	G	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	P	E	A	V	R	Q	L	H	R	E	F	L	R	A	G	S	N	V	M	Q	T	F	T	V	N	E	A	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T							T	T									T		.	.	.	.	.	.	.	.	.	.	.	.	.	.																T		S											.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.															.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	K	A	L	I	G	K	S	V	E	L	A	R	K	A	R	E	A	Y	L	A	E	N	P	Q	A	G	T	L	L	V	A	G	S	V	G	P	Y	G	A	Y	L	A	D	G	S	E	Y	R	G	D	Y	H	C	S	V	E	A	F	Q	A	F	H	R	P	R	V	E	A	L	L	D	A	G	A	D	L	L	A
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	A	A	D	I	A	R	Q	V	A	D	E	.	.	.	.	.	.	.	.	G	D	A	L	V	A	G	G	V	S	Q	T	P	S	Y	L	S	A	K	S	E	.	.	.	.	.	.	.	.	.	T	E	V	K	K	V	F	L	Q	Q	L	E	V	F	M	K	K	N	V	D	F	L	I
Template Known Secondary structure		.	.	.	.	.	.	.	.											T	.	.	.	.	.	.	.	.	T	T															T	T				.	.	.	.	.	.	.	.	.																	T	T		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.												.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.
Template SS confidence
										103	.	.	.	.	.	.	110	.	.	.									.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.										.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure																																																																	.																.
Query SS confidence																																																																	.																.
Query Sequence		C	E	T	L	P	N	F	S	E	I	E	A	L	A	E	L	L	T	A	Y	P	R	A	R	A	W	F	S	F	T	L	R	D	S	E	H	L	S	D	G	T	P	L	R	D	V	V	A	L	L	A	G	Y	P	Q	V	V	A	L	G	I	N	C	.	I	A	L	E	N	T	T	A	A	L	Q	H	L	H	G	.
Query Conservation																																																																	.																.
Alig confidence																					.																.																		.										.																.
Template Conservation																					.																.																		.
Template Sequence		A	E	Y	F	E	H	V	E	E	A	V	W	A	V	E	T	L	I	A	.	S	G	K	P	V	A	A	T	M	A	I	G	P	E	G	.	D	L	H	G	V	P	P	G	E	A	A	V	R	L	V	K	A	.	G	A	S	I	I	G	V	N	C	H	F	D	P	T	I	S	L	K	T	V	K	L	M	K	E	G
Template Known Secondary structure						S													G	G	.	G	S	S									B	T	T	B	.	S	T	T	S													T	.	T		S						S	S	S
Template Predicted Secondary structure																					.																.																		.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
						245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.											270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	L	T	V	L	P	L	V	V	Y	P	N	S	G	E	H	Y	D	A	V	S	K	T	W	H	H	.	.	.	.	.	.	.	.	.	.	H	G	E	H	C	A	Q	L	A	D	Y	L	P	Q	W	Q	A	A	G	A	R	L	I	G	G	C	C	R	T	T	P	A	D	I	A	A	L	K	A	R
Query Conservation		.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																										.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	A	A	Q	L	K	A	H	L	M	S	Q	P	L	A	Y	H	T	P	D	A	N	K	Q	G	F	I	D	L	P	E	F	P	F	G	L	E	P	R	V	A	T	R	W	D	I	Q	K	Y	A	R	E	A	Y	N	L	G	V	R	Y	I	G	G	C	C	G	F	E	P	Y	H	I	R	A	I	A	E	E
Template Known Secondary structure					T	T											S	B			T	T			T	T		G	G	G	S	T	T	T	T	T	S		G	G	G	B																	T								T	T
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions