Job Description Q47690 Confidence 48.73% Date Thu Jan 5 12:37:05 GMT 2012 Rank 83 Aligned Residues 160 % Identity 18% Template c3navB_ PDB info PDB header:lyase Chain: B: PDB Molecule:tryptophan synthase alpha chain; PDBTitle: crystal structure of an alpha subunit of tryptophan synthase from2 vibrio cholerae o1 biovar el tor str. n16961 Resolution 2.10 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.												70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	P	E	L	I	R	E	V	H	L	D	Y	Y	R	A	G	A	Q	C	A	I	T	A	.	.	.	.	.	.	.	.	.	.	.	S	Y	Q	A	T	P	A	G	F	A	A	R	G	L	D	E	A	Q	S	K	A	L	I	G	K	S	V	E	L	A	R	K	A	R	E	A	Y	L	A	E	N	P	Q	A	G	T
Query Conservation																									.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.																.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.																.	.	.	.	.
Template Sequence		N	P	E	Q	S	L	A	I	M	Q	T	L	I	D	A	G	A	D	A	L	E	L	G	M	P	F	S	D	P	L	A	D	G	P	T	I	Q	G	A	N	L	R	A	L	A	A	K	T	T	.	.	.	.	.	.	.	P	D	I	C	F	E	L	I	A	Q	I	R	A	R	N	.	.	.	.	.	P	E	T	P
Template Known Secondary structure																T	T		S	S										T	T																T	T			.	.	.	.	.	.	.																.	.	.	.	.	T	T	S
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.																.	.	.	.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.								.	.	80	.	.	.	.	.	.	.	.	.	90	.	.						.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	L	V	A	G	S	V	G	P	Y	G	A	Y	L	A	D	G	S	E	Y	R	G	D	Y	H	C	S	V	E	A	F	Q	A	F	H	R	P	R	V	E	A	L	L	D	A	G	A	D	L	L	A	C	E	T	L	P	N	F	S	E	I	E	A	L	A	E	L	L	T	A	Y	P	R	A	R	A	W	F	S	F
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																			.																					.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																			.																					.	.	.
Template Sequence		I	G	L	L	M	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	A	N	L	V	Y	A	R	G	I	D	D	F	.	.	.	.	.	.	.	Y	Q	R	C	Q	K	A	G	V	D	S	V	L	I	A	D	V	P	.	T	N	E	S	Q	P	F	V	A	A	A	E	K	F	G	I	Q	P	I	F	.	.	.
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.							T	T						.	.	.	.	.	.	.								T							T	T	S		.	G	G	G											T	T						.	.	.
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.																			.																					.	.	.
Template SS confidence
		97	.	.	100	.														.	.	.	.	.	.	.	.	110	.	.	.	.								.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.		.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	R	D	S	E	H	L	S	D	G	T	P	L	R	D	V	V	A	L	L	A	G	Y	P	Q	V	V	A	L	G	I	N	C	I	A	L	E	N	T	T	A	A	L	Q	H	L	H	G	L	T	V	L	P	L	V	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																.	.	.
Template Conservation		.	.	.	.	.	.	.																																.	.	.
Template Sequence		.	.	.	.	.	.	.	I	A	P	P	T	A	S	D	E	T	L	R	A	V	A	Q	L	G	K	G	Y	T	Y	L	L	S	R	A	P	V	H	.	.	.	A	L	L	E	R	L	Q	Q	F	D	A	P	P	A	L	L
Template Known Secondary structure		.	.	.	.	.	.	.				T	T			S												S												.	.	.									T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																																.	.	.
Template SS confidence
									153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.				.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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