Job Description Q47690 Confidence 82.62% Date Thu Jan 5 12:37:05 GMT 2012 Rank 26 Aligned Residues 197 % Identity 10% Template c3kruC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:nadh:flavin oxidoreductase/nadh oxidase; PDBTitle: crystal structure of the thermostable old yellow enzyme from2 thermoanaerobacter pseudethanolicus e39 Resolution 1.60 Å

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		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
Predicted Secondary structure																																																																										.	.	.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.	.	.
Query Sequence		E	L	I	R	E	V	H	L	D	Y	Y	R	A	G	A	Q	C	A	I	T	A	S	Y	Q	A	T	P	A	G	F	A	A	R	G	L	D	E	A	Q	S	K	A	L	I	G	K	S	V	E	L	A	R	K	A	R	E	A	Y	L	A	E	N	P	Q	A	G	T	L	L	V	A	G	.	.	.	.	.	.	.	.
Query Conservation																																																																										.	.	.	.	.	.	.	.
Alig confidence																																																											.	.	.	.	.	.	.									.	.	.	.	.	.	.	.
Template Conservation																																																											.	.	.	.	.	.	.
Template Sequence		D	W	H	I	V	H	Y	A	T	R	A	I	G	G	V	G	L	I	M	Q	E	A	T	A	V	E	S	R	G	R	I	T	D	H	D	L	G	I	W	N	D	E	Q	V	K	E	L	K	K	I	V	D	I	C	K	A	N	.	.	.	.	.	.	.	G	A	V	M	G	I	Q	L	A	H	A	G	R	K	C	N
Template Known Secondary structure														T	T		S									S	S	G	G	G		S	S	T	T	S		B		S	S	T																T	.	.	.	.	.	.	.	T											G	G	G
Template Predicted Secondary structure																																																											.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.								.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
							121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140		.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170											.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																					.																															.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																					.																															.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	S	V	G	P	Y	G	A	Y	L	A	D	G	S	E	Y	R	G	D	Y	H	.	C	S	V	E	A	F	Q	A	F	H	R	P	R	V	E	A	L	L	D	A	G	A	D	L	L	A	C	E	T	L	.	.	.	.	.	.	.	.	.	.	P	N	F	S	E	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.																					.																															.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																					.																															.	.	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	Y	E	D	V	V	G	P	S	P	I	K	A	G	D	R	Y	K	L	P	R	E	L	S	V	E	E	I	K	S	I	V	K	A	F	G	E	A	A	K	R	A	N	L	A	G	Y	D	V	V	E	I	H	A	A	H	G	Y	L	I	H	E	F	L	S	P	L	S	N	K	R	K	D	E	Y	G	N	S	I
Template Known Secondary structure			T	T	S					S	S	S			S	S	T	T	S																													T		S								T	T	S								T	T	T					S	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
								176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.		220	.	.	.	.	.	.	.	.	.	230	.										.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																																													.													.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																																													.													.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	I	E	A	L	A	E	L	L	T	A	Y	P	R	A	R	A	W	F	S	F	T	L	R	D	S	E	H	L	S	D	G	T	P	L	R	D	V	V	A	L	L	A	G	Y	.	P	Q	V	V	A	L	G	I	N	C	I	A	.	.	.	.	.	.	.	.	.	L	E	N	T	T	A	A	L
Query Conservation		.	.	.	.	.	.																																													.													.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																																													.													.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	N	R	A	R	F	L	I	E	V	I	D	E	V	R	K	N	W	P	E	N	K	P	I	F	V	R	V	S	A	D	D	Y	M	E	G	G	I	N	I	D	M	M	V	E	Y	I	N	M	I	K	D	K	V	D	L	I	D	V	S	S	G	G	L	L	N	V	D	I	N	L	Y	P	G	Y	Q	V	K	Y	A
Template Known Secondary structure					T													T	S		T	T	S											S	S	T	T	S														T	T	T		S									S	S								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
		240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	L	H	G	L	T	V	L	P	L	V	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	T	I	K	K	R	C	N	I	K	T	S	A
Template Known Secondary structure									T
Template Predicted Secondary structure
Template SS confidence
		270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions