Job Description Q47690 Confidence 91.24% Date Thu Jan 5 12:37:05 GMT 2012 Rank 9 Aligned Residues 171 % Identity 15% Template c3h5dD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: dihydrodipicolinate synthase from drug-resistant streptococcus2 pneumoniae Resolution 1.99 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.							.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.															.	.
Query SS confidence																																																	.	.	.	.	.	.															.	.
Query Sequence		Y	G	A	Y	L	A	D	G	S	E	Y	R	G	D	Y	H	C	S	V	E	A	F	Q	A	F	H	R	P	R	V	E	A	L	L	D	A	G	A	D	L	L	A	C	E	T	L	P	.	.	.	.	.	.	N	F	S	E	I	E	A	L	A	E	L	L	T	A	.	.	Y	P	R	A	R	A	W	F	S	F	T
Query Conservation																																																	.	.	.	.	.	.															.	.
Alig confidence																										.	.	.	.																				.	.	.	.	.	.															.	.
Template Conservation																										.	.	.	.
Template Sequence		C	K	I	I	T	A	F	I	T	P	F	H	E	D	G	S	I	N	F	D	A	I	P	A	.	.	.	.	L	I	E	H	L	L	A	H	H	T	D	G	I	L	L	A	G	T	T	A	E	S	P	T	L	T	H	D	E	E	L	E	L	F	A	A	V	Q	K	V	V	N	G	R	V	P	L	I	A	G	V	G
Template Known Secondary structure												B		T	T	S	S	B		T	T					.	.	.	.								T	T							S	S	T	T	T	T	G	G	G	S																S	S	S	S	S
Template Predicted Secondary structure																										.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.					.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.						.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.				.	.	.	.	260	.
Predicted Secondary structure																																	.	.	.	.	.																													.	.	.							.	.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.																													.	.	.							.	.	.	.	.	.	.
Query Sequence		L	R	D	S	E	H	L	S	D	G	T	P	L	R	D	V	V	A	L	L	A	G	Y	P	Q	V	V	A	L	G	I	.	.	.	.	.	N	C	I	A	L	E	N	T	T	A	A	L	Q	H	L	H	G	L	T	V	L	P	L	V	V	Y	P	N	.	.	.	S	G	E	H	Y	D	.	.	.	.	.	.	.
Query Conservation																																	.	.	.	.	.																													.	.	.							.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.																		.	.	.	.	.																													.	.	.							.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.	.
Template Sequence		T	N	D	T	R	D	S	I	.	.	.	.	.	.	E	F	V	K	E	V	A	E	F	G	G	F	A	A	G	L	A	I	V	P	Y	Y	N	K	P	S	Q	E	G	M	Y	Q	H	F	K	A	I	A	D	A	S	D	L	P	I	I	I	Y	N	I	P	G	R	V	V	V	E	L	T	P	E	T	M	L	R	L
Template Known Secondary structure			S	S						.	.	.	.	.	.													S									S	S																	S		S	S												S
Template Predicted Secondary structure										.	.	.	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.							.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
			262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	A	V	S	K	T	W	H	H	H	G	E	H	C	A	Q	L	A	D	Y	L	P	Q	W	Q	A	A	G	A	R	L	I	G	G	C	C	R	T	T	P	A	D	I	A	A
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		A	D	H	P	N	I	I	G	V	K	E	C	T	S	L	A	N	M	A	Y	L	I	E	H	K	P	E	E	F	L	I	Y	T	G	E	D	G	D	A	F	H	A	M	N	L
Template Known Secondary structure		T	T	S	T	T								S														S	S						S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions