Job Description Q47690 Confidence 33.90% Date Thu Jan 5 12:37:05 GMT 2012 Rank 121 Aligned Residues 169 % Identity 11% Template c3gr7A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:nadph dehydrogenase; PDBTitle: structure of oye from geobacillus kaustophilus, hexagonal2 crystal form Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		128	.	130	.	.	.	.	.	.	.	.			.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.																			.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
Predicted Secondary structure													.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	L	A	D	G	S	E	Y	R	G	D	.	.	Y	H	C	S	V	E	A	F	Q	A	F	H	R	P	R	V	E	A	L	L	D	A	G	A	D	L	L	A	C	E	T	L	P	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	S	E	I	E	A	L	A	E	L	L	T	A	Y	P
Query Conservation													.	.																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.																		.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																.	.	.	.																																													.
Template Sequence		V	M	S	P	M	C	M	Y	S	C	D	T	K	D	G	A	V	R	T	W	H	K	I	H	Y	P	A	R	A	V	.	.	.	.	G	Q	V	G	L	I	I	V	E	A	T	G	V	T	P	Q	G	R	I	S	E	R	D	L	G	I	W	S	D	D	H	I	A	G	L	R	E	L	V	G	L	V	K	E	.	H
Template Known Secondary structure												T	T	S	S	S																.	.	.	.	T	T		S									S	S	G	G	G		S	S	T	T	S				S	S	T	T															.	T
Template Predicted Secondary structure																																.	.	.	.																																													.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.																														.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Query Sequence		R	A	R	A	W	F	S	F	T	L	R	D	S	E	H	L	S	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	P	L	R	D	V	V	A	L	L	A	G	Y	P	Q	V	V	A	L	G	I	N	C	I	A	.	.	.	.	.	.	.
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.												.	.	.	.	.	.	.
Template Conservation																																																															.
Template Sequence		G	A	A	I	G	I	Q	L	A	H	A	G	R	K	S	Q	V	P	G	E	I	I	A	P	S	A	V	P	F	D	D	S	S	P	T	P	K	E	M	T	K	A	D	I	E	E	T	V	Q	A	F	Q	N	G	A	R	R	A	K	E	A	.	G	F	D	V	I	E	I	H	A	A	H	G	Y	L	I	N	E	F
Template Known Secondary structure		T											G	G	G			S	S	S					S	S	S			S	S	T	T	S																													.	T		S								T	T
Template Predicted Secondary structure																																																															.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
																					232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E	N	T	T	A	A	L	Q	H	L	H	G	L	T	V	L	P	L	V	V	Y	P	N	S	G	E	H	Y	D	A	V	S	K	T	W	H	H	H	G	E	H	C	A	Q	L	A	D	Y	L	P	Q	W	Q	A	A	G	A	R	L	I
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation																																																	.	.	.	.	.	.	.	.
Template Sequence		L	S	P	L	S	N	R	R	Q	D	E	Y	G	G	S	P	E	N	R	Y	R	F	L	G	E	V	I	D	A	V	R	E	V	W	D	G	P	L	F	V	R	I	S	A	S	D	Y	.	.	.	.	.	.	.	.	H	P	D	G	L	T	A	K	D	Y	V	P	Y	A	K	R	M	K	E	Q	G	V	D	L	V
Template Known Secondary structure				T	T	T					S	T	T	S	S	S																					S								S				.	.	.	.	.	.	.	.	S	T	T	S			G	G	G											T	T
Template Predicted Secondary structure																																																	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.									.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.
		293	.	.	.	.	.													.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	C	C	R	T	.	.	.	.	.	.	.	.	.	.	.	.	T	P	A	D	I	A	A	L	K	A	R	S
Query Conservation								.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	S	S	G	A	I	V	P	A	R	M	N	V	Y	P	G	Y	Q	V	P	F	A	E	L	I	R	R	E	A
Template Known Secondary structure								S	S								T	T	T	T											T
Template Predicted Secondary structure
Template SS confidence
		247	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions