Job Description Q47690 Confidence 52.49% Date Thu Jan 5 12:37:05 GMT 2012 Rank 72 Aligned Residues 153 % Identity 16% Template c3fluD_ PDB info PDB header:lyase Chain: D: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from the pathogen2 neisseria meningitidis Resolution 2.00 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	E	L	I	R	E	V	H	L	D	Y	Y	R	A	G	A	Q	C	A	I	T	A	S	Y	Q	A	T	P	A	G	F	A	A	R	G	L	D	E	A	Q	S	K	A	L	I	G	K	S	V	E	L	A	R	K	A	R	E	A	Y	L	A	E	N	P	Q	A	G	T	L	L	V	A	G	S	V	G	P	Y	G
Query Conservation
Alig confidence																																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		H	Y	E	Q	L	R	D	L	I	D	W	H	I	E	N	G	T	D	G	I	V	A	V	G	T	T	G	E	S	A	T	L	.	.	.	.	.	S	V	E	E	H	T	A	V	I	E	A	V	V	K	H	V	.	.	.	.	.	.	.	.	.	.	.	.	A	K	R	V	P	V	I	A	G	T	G	A	N	.	.
Template Known Secondary structure																T	T							S	S	T	T	T	T	G	G	G	S	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S									S	.	.
Template Predicted Secondary structure																																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.													.	.	70	.	.	.	.	.	.	.	.	.	80
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		A	Y	L	A	D	G	S	E	Y	R	G	D	Y	H	C	S	V	E	A	F	Q	A	F	H	R	P	R	V	E	A	L	L	D	A	G	A	D	L	L	A	C	E	T	L	P	.	.	.	.	N	F	S	E	I	E	A	L	A	E	L	L	T	A	Y	P	R	A	R	A	W	F	S	F	T	L	R	D	S	E	H
Query Conservation																																															.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.																				.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	T	V	E	A	I	A	.	.	.	.	L	S	Q	A	A	E	K	A	G	A	D	Y	T	L	S	V	V	P	Y	Y	N	K	P	S	Q	E	G	I	Y	Q	H	F	K	T	I	A	E	A	T	S	I	P	M	I	I	Y	N	V	P	G	R	T	V	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S							.	.	.	.									T		S									S	S																	T			S												S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Template SS confidence
																	81	.	.	.	.	.	.					.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	D	G	T	P	L	R	D	V	V	A	L	L	A	G	Y	P	Q	V	V	A	L	G	I	N	C	I	A	L	E	N	T	T	A	A	L	Q	H
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		S	M	T	.	.	.	.	N	D	T	I	L	R	L	A	E	I	P	N	I	V	G	V	K	E	A	S	G	N	I	G	S	N	I	E	L	I	N	R
Template Known Secondary structure					.	.	.	.								T	T	S	T	T								S
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		142	.	.					.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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