Job Description Q47690 Confidence 54.01% Date Thu Jan 5 12:37:05 GMT 2012 Rank 66 Aligned Residues 184 % Identity 13% Template c3ez4B_ PDB info PDB header:transferase Chain: B: PDB Molecule:3-methyl-2-oxobutanoate hydroxymethyltransferase; PDBTitle: crystal structure of 3-methyl-2-oxobutanoate2 hydroxymethyltransferase from burkholderia pseudomallei Resolution 2.10 Å

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	G	A	Q	C	A	I	T	A	S	Y	Q	A	T	P	A	G	F	A	A	R	G	L	D	E	A	Q	S	K	A	L	I	G	K	S	V	E	L	A	R	K	A	R	E	A	Y	L	A	E	N	P	Q	A	G	T	L	L	V	A	G	S	V	G	P	Y	G	A	Y	L	A	D	G	S	E	Y	R	G	D	Y
Query Conservation
Alig confidence											.																																.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.																																.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	A	N	V	D	V	Q	L	I	.	G	D	S	L	G	N	V	L	Q	G	Q	A	T	T	L	P	V	T	L	D	D	I	A	Y	H	T	A	C	V	A	R	.	.	.	.	.	.	.	.	.	.	.	A	Q	P	R	G	L	V	V	A	D	L	P	.	.	.	.	.	.	.	.	.	.	.	.	F	G	T	Y
Template Known Secondary structure			T	T		S					.		T	T					T	T			S	S	S	T	T																.	.	.	.	.	.	.	.	.	.	.	T			S	S								.	.	.	.	.	.	.	.	.	.	.	.	T	T	S
Template Predicted Secondary structure											.																																.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.												.	.	.	.	.	.	.	80	.	.	.	.													.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		H	C	S	V	E	A	F	Q	A	F	H	R	P	R	V	E	A	L	L	D	A	G	A	D	L	L	A	C	E	T	L	P	N	F	S	E	I	E	A	L	A	E	L	L	T	A	Y	P	R	A	R	A	W	F	S	F	T	L	R	D	S	E	H	L	S	D	G	T	P	L	R	D	V	V	A	L	L	A	G	Y
Query Conservation
Alig confidence											.	.	.	.	.																								.	.	.							.										.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.	.																								.	.	.							.										.	.	.	.	.	.	.	.	.	.
Template Sequence		G	T	P	A	D	A	F	A	S	.	.	.	.	.	A	V	K	L	M	R	A	G	A	Q	M	V	K	L	E	G	G	E	W	L	A	E	T	.	.	.	V	R	F	L	V	E	.	R	A	V	P	V	C	A	H	V	.	.	.	.	.	.	.	.	.	.	G	L	G	A	A	Q	L	L	R	D	A	R	A	V
Template Known Secondary structure		S	S								.	.	.	.	.							T	T		S								G	G	G				.	.	.							.	T	T								.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.	.																								.	.	.							.										.	.	.	.	.	.	.	.	.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.						.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.		.	.	.	130	.	.	.	.	.											.	.	.	.	140	.	.	.	.	.	.	.	.	.
				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.										.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure		.	.																									.	.	.	.	.	.	.	.	.													.
Query SS confidence		.	.																									.	.	.	.	.	.	.	.	.													.
Query Sequence		.	.	P	Q	V	V	A	L	G	I	N	C	I	A	L	E	N	T	T	A	A	L	Q	H	L	H	.	.	.	.	.	.	.	.	.	G	L	T	V	L	P	L	V	V	Y	P	N	.	S	G	E	H	Y	D	A	V	S	K	T	W	H	H	H	G	E	H	C	A	Q	L	A	D	Y	L	P	Q	W	Q	A
Query Conservation		.	.																									.	.	.	.	.	.	.	.	.													.
Alig confidence		.	.																									.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		E	E	A	G	A	Q	L	I	V	L	E	A	V	P	T	L	V	A	A	E	V	T	R	E	L	S	I	P	T	I	G	I	G	A	G	A	E	C	S	G	Q	V	L	V	L	H	D	M	L	G	V	F	P	G	K	R	P	R	F	V	K	D	F	M	Q	G	Q	P	S	I	F	A	A	V	E	A	Y	V	R
Template Known Secondary structure					T		S						S														S	S						S	S		S		S	S										T	T			S	S				T	T				S	S	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions