Job Description Q47690 Confidence 43.76% Date Thu Jan 5 12:37:05 GMT 2012 Rank 93 Aligned Residues 156 % Identity 21% Template c3eb2A_ PDB info PDB header:lyase Chain: A: PDB Molecule:putative dihydrodipicolinate synthetase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 rhodopseudomonas palustris at 2.0a resolution Resolution 2.04 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	E	L	I	R	E	V	H	L	D	Y	Y	R	A	G	A	Q	C	A	I	T	A	S	Y	Q	A	T	P	A	G	F	A	A	R	G	L	D	E	A	Q	S	K	A	L	I	G	K	S	V	E	L	A	R	K	A	R	E	A	Y	L	A	E	N	P	Q	A	G	T	L	L	V	A	G	S	V	G	P	Y	G
Query Conservation
Alig confidence																																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		R	A	D	V	M	G	R	L	C	D	D	L	I	Q	A	G	V	H	G	L	T	P	L	G	S	T	G	E	F	A	Y	L	.	.	.	.	.	G	T	A	Q	R	E	A	V	V	R	A	T	I	E	A	A	.	.	.	.	.	.	.	.	.	.	.	.	Q	R	R	V	P	V	V	A	G	V	A	S	T	.	.
Template Known Secondary structure																T	T		S		B	B	T	T	S	G	G	G	T	G	G	G		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S		B							S	.	.
Template Predicted Secondary structure																																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.						.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70													.	.	.	.	.	.	.	.	.	80	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		A	Y	L	A	D	G	S	E	Y	R	G	D	Y	H	C	S	V	E	A	F	Q	A	F	H	R	P	R	V	E	A	L	L	D	A	G	A	D	L	L	A	C	E	T	L	P	.	.	.	.	N	F	S	E	I	E	A	L	A	E	L	L	T	A	Y	P	R	A	R	A	W	F	S	F	T	L	R	D	S	E	H
Query Conservation																																															.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.																				.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	A	D	A	V	A	.	.	.	.	Q	A	K	L	Y	E	K	L	G	A	D	G	I	L	A	I	L	E	A	Y	F	P	L	K	D	A	Q	I	E	S	Y	F	R	A	I	A	D	A	V	E	I	P	V	V	I	Y	T	N	P	Q	F	Q	R	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S							.	.	.	.									T		S									S	S																			S	S								T	T	T		S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Template SS confidence
																	84	.	.	.	.	.	90					.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	D	G	T	P	L	R	D	V	V	A	L	L	A	G	Y	P	Q	V	V	A	L	G	I	N	C	I	A	L	E	N	T	T	A	A	L	Q	H	L	H	G
Query Conservation
Alig confidence					.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		D	L	T	.	.	.	.	L	D	V	I	A	R	L	A	E	H	P	R	I	R	Y	I	K	D	A	S	T	N	T	G	R	L	L	S	I	I	N	R	C	G	D
Template Known Secondary structure					.	.	.	.									T	S	T	T								S	S													G	G
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		145	.	.					.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions