Job Description Q47690 Confidence 32.23% Date Thu Jan 5 12:37:05 GMT 2012 Rank 126 Aligned Residues 159 % Identity 16% Template c3d0cB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 oceanobacillus iheyensis at 1.9 a resolution Resolution 1.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	E	L	I	R	E	V	H	L	D	Y	Y	R	A	G	A	Q	C	A	I	T	A	S	Y	Q	A	T	P	A	G	F	A	A	R	G	L	D	E	A	Q	S	K	A	L	I	G	K	S	V	E	L	A	R	K	A	R	E	A	Y	L	A	E	N	P	Q	A	G	T	L	L	V	A	G	S	V	G	P	Y	G
Query Conservation
Alig confidence																																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Sequence		D	W	K	G	L	D	D	N	V	E	F	L	L	Q	N	G	I	E	V	I	V	P	N	G	N	T	G	E	F	Y	A	L	.	.	.	.	.	T	I	E	E	A	K	Q	V	A	T	R	V	T	E	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	R	A	T	V	V	A	G	I	G	Y	.	.
Template Known Secondary structure																T	T						T	T	S	G	G	G	T	G	G	G	S	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S								S	.	.
Template Predicted Secondary structure																																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60						.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.														.	.	.	80	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																													.	.	.	.
Query SS confidence																																													.	.	.	.
Query Sequence		A	Y	L	A	D	G	S	E	Y	R	G	D	Y	H	C	S	V	E	A	F	Q	A	F	H	R	P	R	V	E	A	L	L	D	A	G	A	D	L	L	A	C	E	T	.	.	.	.	L	P	N	F	S	E	I	E	A	L	A	E	L	L	T	A	Y	P	R	A	R	A	W	F	S	F	T	L	R	D	S	E	H
Query Conservation																																													.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.																		.	.	.	.																										.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.																																															.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	V	D	T	A	I	E	.	.	.	.	L	G	K	S	A	I	D	S	G	A	D	C	V	X	I	H	Q	P	V	H	P	Y	I	T	D	A	G	A	V	E	Y	Y	R	N	I	I	E	A	L	D	A	P	S	I	I	Y	.	.	.	.	.	.	.	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S							.	.	.	.								T	T		S										S																		S	S	S						.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.																																															.	.	.	.	.	.	.
Template SS confidence
																	89	90	.	.	.	.	.					.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.								.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	D	G	T	P	L	R	D	V	V	A	L	L	A	G	Y	P	Q	V	V	A	L	G	I	N	C	I	A	L	E	N	T	T	A	A	L	Q	H	L	H	G	L	T	V	L	P	L	V	V
Query Conservation
Alig confidence									.
Template Conservation									.
Template Sequence		K	D	A	H	L	S	D	.	D	V	I	K	E	L	A	P	L	D	K	L	V	G	I	K	Y	A	I	N	D	I	Q	R	V	T	Q	V	X	R	A	V	P	K	S	S	N	V	A	F	I	C
Template Known Secondary structure				T	T	S		T	.							T	T		T	T																					S		G	G	G
Template Predicted Secondary structure									.
Template SS confidence
		143	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions