Job Description Q47690 Confidence 100.00% Date Thu Jan 5 12:37:05 GMT 2012 Rank 2 Aligned Residues 274 % Identity 27% Template c3bolB_ PDB info PDB header:transferase Chain: B: PDB Molecule:5-methyltetrahydrofolate s-homocysteine PDBTitle: cobalamin-dependent methionine synthase (1-566) from2 thermotoga maritima complexed with zn2+ Resolution 1.85 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	Q	N	N	P	L	R	A	L	L	D	K	Q	D	I	L	L	L	D	G	A	M	A	T	E	L	E	A	R	G	C	N	L	A	D	S	L	W	S	A	K	V	L	V	E	N	P	E	L	I	R	E	V	H	L	D	Y	Y	R	A	G	A	Q	C	A	I	T	A	S	Y	Q	A	T	P	A	G	F	A	A
Query Conservation
Alig confidence																.																										.	.	.	.
Template Conservation																.																										.	.	.	.
Template Sequence		M	R	N	R	R	E	V	S	K	L	L	S	E	R	.	V	L	L	L	D	G	A	Y	G	T	E	F	M	K	Y	G	Y	D	D	L	P	E	E	L	N	.	.	.	.	I	K	A	P	D	V	V	L	K	V	H	R	S	Y	I	E	S	G	S	D	V	I	L	T	N	T	F	G	A	T	R	M	K	L	R	K
Template Known Secondary structure																.								S					G	G	G	T			S		G	G	G			.	.	.	.																		T		S					S		T	T		S					G	G
Template Predicted Secondary structure																.																										.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.					40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	L	D	E	A	Q	S	K	A	L	I	G	K	S	V	E	L	A	R	K	A	R	E	A	Y	L	A	E	N	P	Q	A	G	T	L	L	V	A	G	S	V	G	P	Y	G	A	Y	L	A	D	G	S	E	Y	R	G	D	Y	H	C	S	V	E	A	F	Q	A	F	H	R	P	R	V	E	A	L	L	D	A
Query Conservation
Alig confidence							.																		.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template Conservation							.																		.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template Sequence		H	G	L	E	D	.	K	L	D	P	I	V	R	N	A	V	R	I	A	R	R	A	A	.	.	.	.	.	.	.	.	.	.	G	E	K	L	V	F	G	D	I	G	P	T	G	E	L	P	Y	P	L	G	S	T	.	.	.	.	.	.	L	F	E	E	F	Y	E	N	F	R	E	T	V	E	I	M	V	E	E
Template Known Secondary structure		G	T		G	G	.	G																	.	.	.	.	.	.	.	.	.	.	T	T	S										S			B	T	T	T	S	S	B	.	.	.	.	.	.
Template Predicted Secondary structure							.																		.	.	.	.	.	.	.	.	.	.																							.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.											.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.							120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.		230	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.																																													.
Query SS confidence																											.																																													.
Query Sequence		G	A	D	L	L	A	C	E	T	L	P	N	F	S	E	I	E	A	L	A	E	L	L	T	A	.	Y	P	R	A	R	A	W	F	S	F	T	L	R	D	S	E	H	L	S	D	G	T	P	L	R	D	V	V	A	L	L	A	G	Y	P	Q	V	V	A	L	G	I	N	C	.	I	A	L	E	N	T	T	A	A
Query Conservation																											.																																													.
Alig confidence																											.																																			.										.
Template Conservation																																																														.
Template Sequence		G	V	D	G	I	I	F	E	T	F	S	D	I	L	E	L	K	A	A	V	L	A	A	R	E	V	S	R	D	V	F	L	I	A	H	M	T	F	D	E	K	G	R	S	L	T	G	T	D	P	A	N	F	A	I	T	F	D	E	L	.	D	I	D	A	L	G	I	N	C	S	L	G	P	E	E	I	L	P	I
Template Known Secondary structure		T		S																									S	S	S										T	T	S			T	T	S												T	S	.	S		S						S	S	S
Template Predicted Secondary structure																																																														.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.		.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	Q	H	L	H	G	L	T	V	L	P	L	V	V	Y	P	N	S	G	E	H	Y	D	A	V	S	K	T	W	H	H	H	G	E	H	C	A	Q	L	A	D	Y	L	P	Q	W	Q	A	A	G	A	R	L	I	G	G	C	C	R	T	T	P	A	D	I	A	A	L	K	A	R
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	Q	E	L	S	Q	Y	T	D	K	F	L	V	V	E	P	N	A	G	Y	P	.	.	.	.	.	.	.	.	.	.	.	.	L	K	P	H	D	F	A	V	H	I	D	S	Y	Y	E	L	G	V	N	I	F	G	G	C	C	G	T	T	P	E	H	V	K	L	F	R	K	V
Template Known Secondary structure							T	T			S												.	.	.	.	.	.	.	.	.	.	.	.								T	T						T	T	T		S						T	T
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.													.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions