Job Description Q47690 Confidence 61.88% Date Thu Jan 5 12:37:05 GMT 2012 Rank 62 Aligned Residues 160 % Identity 13% Template c3b4uB_ PDB info PDB header:lyase Chain: B: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from agrobacterium2 tumefaciens str. c58 Resolution 1.20 Å

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		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.							.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.			.	190	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.																		.	.
Query SS confidence																																																	.	.	.	.	.	.																		.	.
Query Sequence		Y	G	A	Y	L	A	D	G	S	E	Y	R	G	D	Y	H	C	S	V	E	A	F	Q	A	F	H	R	P	R	V	E	A	L	L	D	A	G	A	D	L	L	A	C	E	T	L	P	.	.	.	.	.	.	N	F	S	E	I	E	A	L	A	E	L	L	T	A	Y	P	R	.	.	A	R	A	W	F	S	F	T
Query Conservation																																																	.	.	.	.	.	.																		.	.
Alig confidence																										.	.	.	.																				.	.	.	.	.	.																		.	.								.
Template Conservation																										.	.	.	.																																																				.
Template Sequence		F	G	L	S	A	A	L	T	T	P	F	K	T	D	G	T	V	D	I	D	A	M	I	A	.	.	.	.	H	A	R	R	C	L	S	N	G	C	D	S	V	T	L	F	G	T	T	G	E	G	C	S	V	G	S	R	E	R	Q	A	I	L	S	S	F	I	A	A	G	I	A	P	S	R	I	V	T	G	V	.
Template Known Secondary structure												B		T	T	S	S	B								.	.	.	.								T	T		S					S	S	T	T	T	T	G	G	G	S		T	T												T	T			G	G	G						.
Template Predicted Secondary structure																										.	.	.	.																																																				.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.					.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.							230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.				.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																									.	.											.	.	.	.	.	.																			.	.	.
Query SS confidence																									.	.											.	.	.	.	.	.																			.	.	.
Query Sequence		L	R	D	S	E	H	L	S	D	G	T	P	L	R	D	V	V	A	L	L	A	G	Y	.	.	P	Q	V	V	A	L	G	I	N	C	.	.	.	.	.	.	I	A	L	E	N	T	T	A	A	L	Q	H	L	H	G	L	T	V	.	.	.	L	P	L	V	V	Y	P	N	S	G	E	H	Y	D	A	V	S	K
Query Conservation																									.	.											.	.	.	.	.	.																			.	.	.
Alig confidence		.	.	.	.	.	.	.	.																.	.											.	.	.	.	.	.																			.	.	.							.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	L	V	D	S	I	E	D	A	A	D	Q	S	A	E	A	L	N	A	G	A	R	N	I	L	L	A	P	P	S	Y	F	K	N	V	S	D	D	G	L	F	A	W	F	S	A	V	F	S	K	I	G	K	D	A	R	D	I	L	V	Y	.	.	.	.	.	.	.	.	.	N	I	P
Template Known Secondary structure		.	.	.	.	.	.	.	.			S	S														T	T		S									S	S		S																			T	T								.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.
Template SS confidence
										80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.										140	.	.
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.		.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		T	W	H	H	H	G	E	H	C	A	Q	L	A	D	Y	L	P	Q	W	Q	A	A	G	A	R	L	I	G	.	G	C	C	R	T	T	P	A	D	I	A	A	L	K	A	R
Query Conservation																														.
Alig confidence																					.	.	.							.
Template Conservation																					.	.	.
Template Sequence		S	V	T	M	V	T	L	S	V	E	L	V	G	R	L	K	A	A	F	.	.	.	P	G	I	V	T	G	V	K	D	S	S	G	N	W	S	H	T	E	R	L	L	K	E
Template Known Secondary structure					S																.	.	.	T	T	T								S
Template Predicted Secondary structure																					.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.				.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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