Job Description Q47690 Confidence 69.65% Date Thu Jan 5 12:37:05 GMT 2012 Rank 46 Aligned Residues 119 % Identity 17% Template c2y0fD_ PDB info PDB header:oxidoreductase Chain: D: PDB Molecule:4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; PDBTitle: structure of gcpe (ispg) from thermus thermophilus hb27 Resolution 2.50 Å

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		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.					.	.	.	190	.	.	.	.	.	.	.	.	.																200	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																									.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	F	H	R	P	R	V	E	A	L	L	D	A	G	A	D	L	L	A	C	E	T	L	P	N	F	S	E	I	E	A	L	A	E	L	L	T	A	Y	.	.	.	.	P	R	A	R	A	W	F	S	F	T	L	R	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	H	L	S	D	G	T	P
Query Conservation																																									.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.																			.	.	.	.														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																						.																																																											.
Template Sequence		E	A	T	T	A	Q	V	L	E	L	H	R	A	G	S	E	I	V	R	L	.	T	V	N	D	E	E	A	A	K	A	V	P	E	I	K	R	R	L	L	A	E	G	V	E	V	P	L	V	G	D	F	H	F	N	G	H	L	L	L	R	K	Y	P	K	M	A	E	A	L	D	K	F	R	I	N	P	E	H	.
Template Known Secondary structure														T	T		S					.				S					T	T											T	T										S	S																	S								T	.
Template Predicted Secondary structure																						.																																																											.
Template SS confidence
		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.			230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		L	R	D	V	V	A	L	L	A	G	Y	P	Q	V	V	A	L	G	I	N	C	.	.	I	A	L	E	N	T	T	A	A	L	Q	H	L	H	G	L	T	V	L	P	L	V	V	Y	P	N	S	G	E	H	Y	D	A	V	S	K	T	W	H	H	H	G	E	H	C	A	Q	L	A	D	Y	L	P	Q	W	Q	A
Query Conservation																							.	.
Alig confidence																							.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	A	E	M	I	R	I	A	M	D	L	G	K	P	V	R	I	G	A	N	W	G	S	L	D	P	A	L	L	T	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	D	R	N	A	S	R	P	E	P	K	S	A	H	E	V	V	L	E	A	L	V	E	S	A	V	R	A	Y	E
Template Known Secondary structure		T									T	T	T									G	G	G	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							S	S	S
Template Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.																			.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions