Job Description Q47690 Confidence 70.29% Date Thu Jan 5 12:37:05 GMT 2012 Rank 44 Aligned Residues 158 % Identity 17% Template c2vc6A_ PDB info PDB header:lyase Chain: A: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: structure of mosa from s. meliloti with pyruvate bound Resolution 1.95 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.							170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.			.	.	.	.	190	.	.	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.																	.	.
Query SS confidence																																														.	.	.	.	.	.																	.	.
Query Sequence		G	A	Y	L	A	D	G	S	E	Y	R	G	D	Y	H	C	S	V	E	A	F	Q	A	F	H	R	P	R	V	E	A	L	L	D	A	G	A	D	L	L	A	C	E	T	.	.	.	.	.	.	L	P	N	F	S	E	I	E	A	L	A	E	L	L	T	A	.	.	Y	P	R	A	R	A	W	F	S	F	T	L
Query Conservation																																														.	.	.	.	.	.																	.	.
Alig confidence													.												.	.	.	.																		.	.	.	.	.	.																	.	.											.	.
Template Conservation													.												.	.	.	.																																																				.	.
Template Sequence		G	S	I	T	A	L	V	T	P	F	A	.	D	D	R	I	D	E	V	A	L	H	D	.	.	.	.	L	V	E	W	Q	I	E	E	G	S	F	G	L	V	P	C	G	T	T	G	E	S	P	T	L	S	K	S	E	H	E	Q	V	V	E	I	T	I	K	T	A	N	G	R	V	P	V	I	A	G	A	.	.
Template Known Secondary structure													.	T	T										.	.	.	.								T	T		S				T	T	S	G	G	G	T	G	G	G	S																	T	T	S	S		B					.	.
Template Predicted Secondary structure													.												.	.	.	.																																																				.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.					.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		198	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.			220	.	.	.	.	.	.	.	.	.						230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																								.	.											.	.	.	.	.
Query SS confidence																								.	.											.	.	.	.	.
Query Sequence		R	D	S	E	H	L	S	D	G	T	P	L	R	D	V	V	A	L	L	A	G	Y	.	.	P	Q	V	V	A	L	G	I	N	C	.	.	.	.	.	I	A	L	E	N	T	T	A	A	L	Q	H	L	H	G	L	T	V	L	P	L	V	V	Y	P	N	S	G	E	H	Y	D	A	V	S	K	T	W	H	H	H
Query Conservation																								.	.											.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.																.	.											.	.	.	.	.																									.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																																									.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	G	S	N	S	T	A	E	A	I	A	F	V	R	H	A	Q	N	A	G	A	D	G	V	L	I	V	S	P	Y	Y	N	K	P	T	Q	E	G	I	Y	Q	H	F	K	A	I	D	A	A	S	T	I	P	I	I	V	Y	.	.	.	.	.	.	.	.	.	N	I	P	G	R	S	A	I
Template Known Secondary structure		.	.	.	.	.	.	.			S	S														T	T		S									S	S																			S	S						.	.	.	.	.	.	.	.	.							S
Template Predicted Secondary structure		.	.	.	.	.	.	.																																																									.	.	.	.	.	.	.	.	.
Template SS confidence
									77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.										.	.	.	.	.	.	.	140
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	H	C	A	Q	L	A	D	Y	L	P	Q	W	Q	A	A	G	A	R	L	I	G	G	C	C	R	T	T	P	A	D	I	A	A	L	K	A	R	S
Query Conservation
Alig confidence															.	.	.	.
Template Conservation															.	.	.	.
Template Sequence		E	I	H	V	E	T	L	A	R	I	F	E	D	.	.	.	.	C	P	N	V	K	G	V	D	A	T	G	N	L	L	R	P	S	L	E	R	M	A	C
Template Known Secondary structure															.	.	.	.		T	T							S			T										S
Template Predicted Secondary structure															.	.	.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions