Job Description Q47690 Confidence 37.70% Date Thu Jan 5 12:37:05 GMT 2012 Rank 108 Aligned Residues 154 % Identity 14% Template c2ehhE_ PDB info PDB header:lyase Chain: E: PDB Molecule:dihydrodipicolinate synthase; PDBTitle: crystal structure of dihydrodipicolinate synthase from2 aquifex aeolicus Resolution 1.90 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	P	E	L	I	R	E	V	H	L	D	Y	Y	R	A	G	A	Q	C	A	I	T	A	S	Y	Q	A	T	P	A	G	F	A	A	R	G	L	D	E	A	Q	S	K	A	L	I	G	K	S	V	E	L	A	R	K	A	R	E	A	Y	L	A	E	N	P	Q	A	G	T	L	L	V	A	G	S	V	G	P	Y	G
Query Conservation
Alig confidence																																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation																																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Sequence		D	Y	E	A	L	G	N	L	I	E	F	H	V	D	N	G	T	D	A	I	L	V	C	G	T	T	G	E	S	P	T	L	.	.	.	.	.	T	F	E	E	H	E	K	V	I	E	F	A	V	K	R	A	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	R	I	K	V	I	A	G	T	G	G	N	.
Template Known Secondary structure															T	T	T		S					S	S	T	T	T	T	G	G	G	S	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T	S	S									S	.
Template Predicted Secondary structure																																		.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50						.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.														.	.	.	70	.	.	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure																																															.	.	.	.
Query SS confidence																																															.	.	.	.
Query Sequence		A	Y	L	A	D	G	S	E	Y	R	G	D	Y	H	C	S	V	E	A	F	Q	A	F	H	R	P	R	V	E	A	L	L	D	A	G	A	D	L	L	A	C	E	T	L	P	.	.	.	.	N	F	S	E	I	E	A	L	A	E	L	L	T	A	Y	P	R	A	R	A	W	F	S	F	T	L	R	D	S	E	H
Query Conservation																																															.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.																				.	.	.	.																							.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.																																														.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	T	H	E	A	V	H	.	.	.	.	L	T	A	H	A	K	E	V	G	A	D	G	A	L	V	V	V	P	Y	Y	N	K	P	T	Q	R	G	L	Y	E	H	F	K	T	V	A	Q	E	V	D	I	P	I	I	I	.	.	.	Y	N	I	P	S	R
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.								T	T		S									S	S																				S					.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.																																														.	.	.
Template SS confidence
																	80	.	.	.	.	.	.					.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	D	G	T	P	L	R	D	V	V	A	L	L	A	G	Y	P	Q	V	V	A	L	G	I	N	C	I	A	L	E	N	T	T	A	A	L	Q	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	C	V	E	I	S	V	D	T	M	F	K	L	A	S	E	C	E	N	I	V	A	S	K	E	S	T	P	N	M	D	R	I	S	E	I	V	K	R
Template Known Secondary structure			S																T	T									S
Template Predicted Secondary structure
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions